RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ATG9BQ674R7 924 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 FRMPD2BQ6IN97 320 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 MILR1Q7Z6M3 343 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR4N4Q8N0Y3 316 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 TBC1D19Q8N5T2 526 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR4K1Q8NGD4 311 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR52B6Q8NGF0 335 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR1L3Q8NH93 324 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 MDM1Q8TC05 714 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 USP7Q93009 1102 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 L3HYPDHQ96EM0 354 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 PRR11Q96HE9 360 aaPredicted RBP11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 GATA5Q9BWX5 397 aaPredicted RBP11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 SHCBP1LQ9BZQ2 653 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 SPRTNQ9H040 489 aaPredicted RBP11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 GEMIN8Q9NWZ8 242 aaKnown RBP11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 SERTAD3Q9UJW9 196 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 PILRAQ9UKJ1 303 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 RNF11Q9Y3C5 154 aa11.48□□□□□ -0.57
HMGB1P8-201ENST00000558211 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 B4E171 279 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 H0YGG7 62 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 ADRB1P08588 477 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 PCNAP12004 261 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 EZRP15311 586 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CD22P20273 847 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CXCR2P25025 360 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 BCL6P41182 706 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 TSPAN7P41732 249 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 GABRA4P48169 554 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 RPS15AP62244 130 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CYP4F2P78329 520 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 REEP5Q00765 189 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 GPS2Q13227 327 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CPSF6Q16630 551 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 HIST2H2ACQ16777 129 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 EXOSC6Q5RKV6 272 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 PRAMEF17Q5VTA0 474 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 FAM219BQ5XKK7 198 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 HIST2H2AA3Q6FI13 130 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 GPR135Q8IZ08 494 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 KRT78Q8N1N4 520 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 BMPERQ8N8U9 685 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR4F6Q8NGB9 312 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 STK35Q8TDR2 534 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 CCT6BQ92526 530 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 RERGQ96A58 199 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 ZNF501Q96CX3 271 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 PTCD3Q96EY7 689 aaKnown RBP11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 TAAR9Q96RI9 348 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 MACROD1Q9BQ69 325 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 C1QTNF3Q9BXJ4 246 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 DRC3Q9H069 523 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 GSTO2Q9H4Y5 243 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 SYNPO2LQ9H987 977 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 POLR1BQ9H9Y6 1135 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 FBXO8Q9NRD0 319 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 KLK4Q9Y5K2 254 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 B3GALT1Q9Y5Z6 326 aa11.47□□□□□ -0.57
HMGB1P8-201ENST00000558211 DCHS1Q96JQ0 3298 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 A0A1B0GTL3 188 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 TRBC2A0A5B9 178 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 FFAR3O14843 346 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 GPR42O15529 346 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 FBXO24O75426 580 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR2B3O76000 313 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR4F21O95013 312 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 CLDN9O95484 217 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 OTCP00480 354 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 DHRS4L1P0CG22 281 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 BGNP21810 368 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 ITGA1P56199 1179 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 ERVPABLB-1P60509 514 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 LAPTM5Q13571 262 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 DDX39BQ13838 428 aaKnown RBP11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 PAGE2BQ5JRK9 111 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 NKAPLQ5M9Q1 402 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 DCAF12Q5T6F0 453 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 LIPJQ5W064 366 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 TTC19Q6DKK2 380 aaPredicted RBP11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMIGD1Q6UXZ0 262 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 CEACAM20Q6UY09 585 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMEM126BQ8IUX1 230 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 ZNF655Q8N720 491 aaPredicted RBP11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 MFSD9Q8NBP5 474 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 MTFMTQ96DP5 389 aaKnown RBP11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 FAM46AQ96IP4 442 aaKnown RBP11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR2A5Q96R48 311 aa11.46□□□□□ -0.57
HMGB1P8-201ENST00000558211 EFCAB11Q9BUY7 163 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms