RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CDHR1Q96JP9 859 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 AK8Q96MA6 479 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SERINC2Q96SA4 455 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 RPF1Q9H9Y2 349 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 GNB4Q9HAV0 340 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 PFDN4Q9NQP4 134 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 THAP10Q9P2Z0 257 aaPredicted RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 KLK11Q9UBX7 282 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 ANAPC5Q9UJX4 755 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 SNX7Q9UNH6 387 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 RUVBL2Q9Y230 463 aaKnown RBP2.72□□□□□ -1.97
SPG11-206ENST00000558093 LIPGQ9Y5X9 500 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 GON4LQ3T8J9 2241 aa2.72□□□□□ -1.97
SPG11-206ENST00000558093 TSPY2A6NKD2 308 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 H3BMM5 538 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 PDHXO00330 501 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 MAGEB2O15479 319 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 ECE2O60344 883 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 RECQL5O94762 991 aaPredicted RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 PGLSO95336 258 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 SPP1P10451 314 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 PCP11498 1178 aaKnown RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 IL4RP24394 825 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 OAS2P29728 719 aaKnown RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 SSTR1P30872 391 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 ETV5P41161 510 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 TNNT2P45379 298 aaPredicted RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 GCKRQ14397 625 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 ZNF146Q15072 292 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 UGCGQ16739 394 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 UPP1Q16831 310 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 HYAL4Q2M3T9 481 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 DNAJC21Q5F1R6 531 aaKnown RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 C1orf141Q5JVX7 400 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 SUSD4Q5VX71 490 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 ERN2Q76MJ5 926 aaKnown RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 DNAJB7Q7Z6W7 309 aaPredicted RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 OR8H2Q8N162 312 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 CCDC185Q8N715 623 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 LSMEM1Q8N8F7 131 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 NSMAFQ92636 917 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 GDAP1L1Q96MZ0 367 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 NACAP1Q9BZK3 213 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 FAM129AQ9BZQ8 928 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 DPEP2Q9H4A9 486 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 JPT2Q9H910 190 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 PHPT1Q9NRX4 125 aaPredicted RBP2.71□□□□□ -1.98
SPG11-206ENST00000558093 TMOD3Q9NYL9 352 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 GPR83Q9NYM4 423 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 C5AR2Q9P296 337 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 ODF2LQ9ULJ1 636 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 TMCC3Q9ULS5 477 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 CCL27Q9Y4X3 112 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 STYXL1Q9Y6J8 313 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 FER1L5A0AVI2 2057 aa2.71□□□□□ -1.98
SPG11-206ENST00000558093 SYNRGQ9UMZ2 1314 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 IGLV3-10A0A075B6K4 115 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 IGHV3-38A0A0C4DH36 116 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TRIM49BA6NDI0 452 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 NKX6-3A6NJ46 265 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TRIM64CA6NLI5 447 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TMEM150CB9EJG8 249 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TCP10L2B9ZVM9 353 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TLX2O43763 284 aaPredicted RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 TBX10O75333 385 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 C9P02748 559 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 CD59P13987 128 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 CTNNA2P26232 953 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 ZFP36L2P47974 494 aaKnown RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 ATP4BP51164 291 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 ZNF131P52739 623 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 RAD23AP54725 363 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 MFAP3P55082 362 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 IRX3P78415 501 aaPredicted RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 C15orf32Q32M92 178 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 LBHQ53QV2 105 aaPredicted RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 FAM133BQ5BKY9 247 aaKnown RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 ZNF542PQ5EBM4 170 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 FAM166AQ6J272 317 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 RPUSD3Q6P087 351 aaKnown RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 DHRS11Q6UWP2 260 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TIPARPQ7Z3E1 657 aaKnown RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 PHLDB2Q86SQ0 1253 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 PRUNE1Q86TP1 453 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 NBPF5PQ86XG9 351 aaPredicted RBP2.7□□□□□ -1.98
SPG11-206ENST00000558093 LINC00612Q8N6U2 182 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 OR5M9Q8NGP3 310 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 FERMT1Q9BQL6 677 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 KCNK13Q9HB14 408 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 SH3GLB2Q9NR46 395 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 AGTPBP1Q9UPW5 1226 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 NCKAP1Q9Y2A7 1128 aa2.7□□□□□ -1.98
SPG11-206ENST00000558093 TRAV18A0A075B6X5 111 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 IGHV3-20A0A0C4DH32 117 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ARHGEF37A1IGU5 675 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ANXA2P2A6NMY6 339 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 CCDC188H7C350 402 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 PGRMC2O15173 223 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ZNF749O43361 778 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 BCL2L11O43521 198 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms