RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SNF8Q96H20 258 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 HIST1H2AHQ96KK5 128 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 OR4K3Q96R72 315 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 HIST1H2AJQ99878 128 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 H2AFJQ9BTM1 129 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TRIM45Q9H8W5 580 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 LRFN1Q9P244 771 aa14.97□□□□□ -0.01
SCFD1-224ENST00000557713 NCOA6Q14686 2063 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-224ENST00000557713 TRBC2A0A5B9 178 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 NDUFS4O43181 175 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 ZNHIT1O43257 154 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 B3GALT4O96024 378 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 PGAM1P18669 254 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 KIR3DL1P43629 444 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 OLR1P78380 273 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 CRYMQ14894 314 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 DEFB134Q4QY38 66 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 RNFT1Q5M7Z0 435 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 STRA8Q7Z7C7 330 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 DOLPP1Q86YN1 238 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 PPIL6Q8IXY8 311 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 KIF2BQ8N4N8 673 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 FAM98AQ8NCA5 519 aaKnown RBP14.96□□□□□ -0.01
SCFD1-224ENST00000557713 NT5CQ8TCD5 201 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 LINGO1Q96FE5 620 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 PBKQ96KB5 322 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 GPAMQ9HCL2 828 aa14.96□□□□□ -0.01
SCFD1-224ENST00000557713 ADAM10O14672 748 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 NME2P1O60361 137 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 NME2P22392 152 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 JAK1P23458 1154 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 TPP2P29144 1249 aaPredicted RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 MLF1P58340 268 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 BTG2P78543 158 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 MAPKAPK3Q16644 382 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 CATSPEREQ5SY80 951 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 RNASEH2BQ5TBB1 312 aaKnown RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 NIPAL1Q6NVV3 410 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 NCCRP1Q6ZVX7 275 aaPredicted RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 FGD2Q7Z6J4 655 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 LRRC8AQ8IWT6 810 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 CNTN4Q8IWV2 1026 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 GHDCQ8N2G8 530 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 NFAM1Q8NET5 270 aaPredicted RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 UTP15Q8TED0 518 aaKnown RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 PTCHD1Q96NR3 888 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 OLFM1Q99784 485 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 SPNS1Q9H2V7 528 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 CLK4Q9HAZ1 481 aaKnown RBP14.95□□□□□ -0.02
SCFD1-224ENST00000557713 ARL15Q9NXU5 204 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 ZFP69BQ9UJL9 534 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 ASB1Q9Y576 335 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 AKAP9Q99996 3911 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 TACC2O95359 2948 aa14.95□□□□□ -0.02
SCFD1-224ENST00000557713 CTAGE15A4D2H0 777 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 B4GALT2O60909 372 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SLC25A12O75746 678 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 ZNF888P0CJ79 500 aaPredicted RBP14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SMIM10L1P0DMW3 83 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 TRHRP34981 398 aaPredicted RBP14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SCTRP47872 440 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 AP1S2P56377 157 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 IL2P60568 153 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SKP1P63208 163 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 HSF1Q00613 529 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 QSOX2Q6ZRP7 698 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 KIAA0408Q6ZU52 694 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 CTAGE6Q86UF2 777 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 ARMC10Q8N2F6 343 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 CPSF7Q8N684 471 aaKnown RBP14.94□□□□□ -0.02
SCFD1-224ENST00000557713 AGAP11Q8TF27 550 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 PHF10Q8WUB8 498 aaKnown RBP14.94□□□□□ -0.02
SCFD1-224ENST00000557713 FBXL8Q96CD0 374 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SMIM10Q96HG1 83 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 DMRTA2Q96SC8 542 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 SPOCK3Q9BQ16 436 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 JRKLQ9Y4A0 524 aa14.94□□□□□ -0.02
SCFD1-224ENST00000557713 IGKV3D-11A0A0A0MRZ8 115 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 TCRBV16S1A1N1A0A5B0 115 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 E9PLN8 166 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 PRMT3O60678 531 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 TTC4O95801 387 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SERPIND1P05546 499 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 ABOP16442 354 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SSTR2P30874 369 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 AHRP35869 848 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 CYB561P49447 251 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 HLCSP50747 726 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 PGGT1BP53609 377 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 CCZ1BP86790 482 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 CCZ1P86791 482 aaPredicted RBP14.93□□□□□ -0.02
SCFD1-224ENST00000557713 RGS1Q08116 209 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 HYAL2Q12891 473 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 CSHL1Q14406 222 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 MSS51Q4VC12 460 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 SPANXN3Q5MJ09 141 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 ABHD13Q7L211 337 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 GALNT7Q86SF2 657 aa14.93□□□□□ -0.02
SCFD1-224ENST00000557713 IGDCC3Q8IVU1 814 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms