RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SPRY4Q9C004 299 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 REXO4Q9GZR2 422 aaKnown RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 SLCO1B3Q9NPD5 702 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 THAP1Q9NVV9 213 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 NDOR1Q9UHB4 597 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 DNAJC15Q9Y5T4 150 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 DMXL2Q8TDJ6 3036 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 TXNDC9O14530 226 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 CPNE3O75131 537 aaKnown RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 KRT6AP02538 564 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 KRT6BP04259 564 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 FGF4P08620 206 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 KRT6CP48668 564 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 PLA2G16P53816 162 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 GUCY1A3Q02108 690 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 UGT3A2Q3SY77 523 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 KANK2Q63ZY3 851 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 RHBDD2Q6NTF9 364 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 IGF2-ASQ6U949 168 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 TIPARPQ7Z3E1 657 aaKnown RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 LRRC8CQ8TDW0 803 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 UTP15Q8TED0 518 aaKnown RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 TUBB1Q9H4B7 451 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 PNPOQ9NVS9 261 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 ANGPTL2Q9UKU9 493 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 RAP2CQ9Y3L5 183 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 TMEM184BQ9Y519 407 aaPredicted RBP14.53□□□□□ -0.08
NEDD1-213ENST00000557644 PCDHGA7Q9Y5G6 932 aa14.53□□□□□ -0.08
NEDD1-213ENST00000557644 SDK2Q58EX2 2172 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 A0A0A6YYC8 382 aaPredicted RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 I3L1I5 382 aaPredicted RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 FOXE1O00358 373 aaPredicted RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 KLF11O14901 512 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 ERI3O43414 337 aaKnown RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 FOXS1O43638 330 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 ITGAXP20702 1163 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 SHC2P98077 582 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 OCRLQ01968 901 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 MUM1Q2TAK8 710 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 FAM214AQ32MH5 1076 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 ADPRMQ3LIE5 342 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 MANEAQ5SRI9 462 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 LCN10Q6JVE6 187 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 UBE3DQ7Z6J8 389 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 PDSS2Q86YH6 399 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 CLYBLQ8N0X4 340 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 CMTM7Q96FZ5 175 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 ILKAPQ9H0C8 392 aaPredicted RBP14.52□□□□□ -0.08
NEDD1-213ENST00000557644 TXLNGQ9NUQ3 528 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 SRPK3Q9UPE1 567 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 MAU2Q9Y6X3 613 aa14.52□□□□□ -0.08
NEDD1-213ENST00000557644 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 RTCAO00442 366 aaKnown RBP14.52□□□□□ -0.09
NEDD1-213ENST00000557644 SERPINB1P30740 379 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 RORAP35398 523 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 OR1D4P47884 311 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 ARSFP54793 590 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 GYS2P54840 703 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 HMGCS1Q01581 520 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 DEFB134Q4QY38 66 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 KHDRBS2Q5VWX1 349 aaKnown RBP14.52□□□□□ -0.09
NEDD1-213ENST00000557644 OR9A4Q8NGU2 314 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 MAGEB18Q96M61 343 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 GBP5Q96PP8 586 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 C17orf62Q9BQA9 187 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 SORBS1Q9BX66 1292 aaKnown RBP14.52□□□□□ -0.09
NEDD1-213ENST00000557644 ACPTQ9BZG2 426 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 THSD1Q9NS62 852 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 MARCOQ9UEW3 520 aaPredicted RBP14.52□□□□□ -0.09
NEDD1-213ENST00000557644 ADGRE2Q9UHX3 823 aa14.52□□□□□ -0.09
NEDD1-213ENST00000557644 A0A1B0GX78 115 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 ZNF860A6NHJ4 632 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 MEN1O00255 615 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 DLGAP3O95886 979 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 JUNP05412 331 aaKnown RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 STXBP1P61764 594 aaKnown RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 PHEXP78562 749 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SLC9A5Q14940 896 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 DEPDC1Q5TB30 811 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 GARNL3Q5VVW2 1013 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 FAM199XQ6PEV8 388 aaPredicted RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 AFAP1L2Q8N4X5 818 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 TWIST2Q8WVJ9 160 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SCN3AQ9NY46 2000 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SLC12A4Q9UP95 1085 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 NAALAD2Q9Y3Q0 740 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SGK494L7N484 410 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 DSCR3O14972 297 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 DNAJB6O75190 326 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SKAP2O75563 359 aaPredicted RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 LINC00032P0C843 101 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 SMIM10L1P0DMW3 83 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 KITP10721 976 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 ALOX12P18054 663 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 PTX3P26022 381 aaPredicted RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 RPL14P50914 215 aaKnown RBP14.51□□□□□ -0.09
NEDD1-213ENST00000557644 EMP3P54852 163 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 FAM53BQ14153 422 aa14.51□□□□□ -0.09
NEDD1-213ENST00000557644 NDUFA9Q16795 377 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms