RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 KIFC1Q9BW19 673 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 ZNF358Q9NW07 568 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 PAK5Q9P286 719 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 KLHL42Q9P2K6 505 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 SH2B3Q9UQQ2 575 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
ABCD4-228ENST00000557588 DNAJC13O75165 2243 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 ZNF407Q9C0G0 2248 aa17.14■□□□□ 0.33
ABCD4-228ENST00000557588 MPC1LP0DKB6 136 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 MEF2AQ02078 507 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-228ENST00000557588 QSOX2Q6ZRP7 698 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 CYP4Z2PQ8N1L4 340 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 PRELID2Q8N945 189 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 NFAM1Q8NET5 270 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-228ENST00000557588 OR52N2Q8NGI0 321 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 PCBD2Q9H0N5 130 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 BFARQ9NZS9 450 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 VPS9D1Q9Y2B5 631 aa17.13■□□□□ 0.33
ABCD4-228ENST00000557588 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-228ENST00000557588 IGKV3D-11A0A0A0MRZ8 115 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 FEZF1A0PJY2 475 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 AP3B1O00203 1094 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 ZBTB14O43829 449 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 GALR3O60755 368 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 ENO3P13929 434 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 NPY2RP49146 381 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 DLX5P56178 289 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 CUL1Q13616 776 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 CAPN13Q6MZZ7 669 aaPredicted RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 CENPUQ71F23 418 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 CILP2Q8IUL8 1156 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 CCDC89Q8N998 374 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 OR5M3Q8NGP4 307 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 POLDIP3Q9BY77 421 aaKnown RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 SLC6A16Q9GZN6 736 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 LIME1Q9H400 295 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 INTS10Q9NVR2 710 aaKnown RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 ZNF148Q9UQR1 794 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 DRG1Q9Y295 367 aaKnown RBP17.12■□□□□ 0.33
ABCD4-228ENST00000557588 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
ABCD4-228ENST00000557588 TCRBV16S1A1N1A0A5B0 115 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 LCMT2O60294 686 aaKnown RBP17.11■□□□□ 0.33
ABCD4-228ENST00000557588 PDE9AO76083 593 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 IPO7O95373 1038 aaKnown RBP17.11■□□□□ 0.33
ABCD4-228ENST00000557588 NR0B1P51843 470 aaKnown RBP17.11■□□□□ 0.33
ABCD4-228ENST00000557588 GPR85P60893 370 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 SKP1P63208 163 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 NIPAL1Q6NVV3 410 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 PAOXQ6QHF9 649 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 CES3Q6UWW8 571 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 MDGA2Q7Z553 956 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 SYCE1Q8N0S2 351 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 MFSD9Q8NBP5 474 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 APCDD1LQ8NCL9 501 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 KCNJ9Q92806 393 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 RMND5BQ96G75 393 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-228ENST00000557588 DEFB126Q9BYW3 111 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-228ENST00000557588 ZDHHC11Q9H8X9 412 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 PNPLA3Q9NST1 481 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
ABCD4-228ENST00000557588 PROM1O43490 865 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 CHST10O43529 356 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 FTCDO95954 541 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 TUBB4AP04350 444 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 MGAT1P26572 445 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 ACVR2AP27037 513 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 GRK3P35626 688 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 CYHR1Q6ZMK1 362 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 C17orf64Q86WR6 236 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 CYP4X1Q8N118 509 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 MBD6Q96DN6 1003 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 PTCHD1Q96NR3 888 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 TTYH2Q9BSA4 534 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 SARGQ9BW04 601 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 SOX13Q9UN79 622 aa17.1■□□□□ 0.33
ABCD4-228ENST00000557588 TRBV11-1A0A0K0K1C0 115 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 OR14I1A6ND48 311 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 FIGNL2A6NMB9 653 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 NDUFS4O43181 175 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 B4GALT2O60909 372 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 DNAJB6O75190 326 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 ITGA10O75578 1167 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 ALOX12P18054 663 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 MAOAP21397 527 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 DNASE1P24855 282 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 RPL22P35268 128 aaKnown RBP17.09■□□□□ 0.33
ABCD4-228ENST00000557588 ZFP36L2P47974 494 aaKnown RBP17.09■□□□□ 0.33
ABCD4-228ENST00000557588 ADAM8P78325 824 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 OLR1P78380 273 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 PWP1Q13610 501 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 TERF2Q15554 542 aa17.09■□□□□ 0.33
ABCD4-228ENST00000557588 GXYLT1Q4G148 440 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms