RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CD68P34810 354 aaPredicted RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 CPOXP36551 454 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 MMP16P51512 607 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 FOXF2Q12947 444 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 NSUN5P2Q63ZY6 315 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 IL20RBQ6UXL0 311 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 PCGF5Q86SE9 256 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 SLC26A11Q86WA9 606 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 VRK3Q8IV63 474 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 NTNG2Q96CW9 530 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 OXNAD1Q96HP4 312 aaPredicted RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 MARK4Q96L34 752 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 TIGD1Q96MW7 591 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 ZNF670Q9BS34 389 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 MED18Q9BUE0 208 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 SLCO5A1Q9H2Y9 848 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 SEMA4BQ9NPR2 832 aaPredicted RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 TUBA8Q9NY65 449 aaPredicted RBP8.66□□□□□ -1.02
NEDD1-211ENST00000557454 IMPACTQ9P2X3 320 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 MYO1AQ9UBC5 1043 aa8.66□□□□□ -1.02
NEDD1-211ENST00000557454 VWFP04275 2813 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 A0A096LNT2 108 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TRBV5-4A0A0C4DH59 114 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 IGKV1-8A0A0C4DH67 115 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 LRRD1A4D1F6 860 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 MBD3L3A6NE82 208 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TCF21O43680 179 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 PHF2O75151 1096 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 FTH1P02794 183 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TMIGD3P0DMS9 266 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 NFKB1P19838 968 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 CNR1P21554 472 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 CMPK1P30085 196 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 MC4RP32245 332 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 BCL6P41182 706 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TRPC1P48995 793 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 RPS4XP62701 263 aaKnown RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 PLOD1Q02809 727 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 HYAL2Q12891 473 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 NAA25Q14CX7 972 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TAF1AQ15573 450 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 DBN1Q16643 649 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TPD52L1Q16890 204 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 ZNF750Q32MQ0 723 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TEX44Q53QW1 395 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 VASNQ6EMK4 673 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 DNM1P46Q6ZS02 220 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 FAM47EQ6ZV65 393 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TAS2R42Q7RTR8 314 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 SLC22A15Q8IZD6 547 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 C9orf106Q8NAJ2 232 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 APCDD1LQ8NCL9 501 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 NFAM1Q8NET5 270 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 MBD3L2Q8NHZ7 208 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 NEIL3Q8TAT5 605 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 MCOLN3Q8TDD5 553 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 ASB15Q8WXK1 588 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 SYN2Q92777 582 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 PEX11GQ96HA9 241 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 BTBD6Q96KE9 485 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 TRIB1Q96RU8 372 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-211ENST00000557454 SMARCAL1Q9NZC9 954 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 PCYOX1Q9UHG3 505 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 HEY1Q9Y5J3 304 aa8.65□□□□□ -1.02
NEDD1-211ENST00000557454 IGHV4-30-2A0A087WSY4 118 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 C15orf38-AP3S2A0A0A6YYH1 394 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 ZNF860A6NHJ4 632 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 A8MUA0 341 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 TXNDC9O14530 226 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 LMX1BO60663 402 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 OR2J2O76002 312 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 CDK11BP21127 795 aaKnown RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 SOX3P41225 446 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 SSR1P43307 286 aaKnown RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 BDKRB1P46663 353 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 ZNF140P52738 457 aaPredicted RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 VLDLRP98155 873 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 GPR33Q49SQ1 333 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 CCSMST1Q4G0I0 132 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 XKR6Q5GH73 641 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 FAM120AOSQ5T036 256 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 RNF187Q5TA31 235 aaPredicted RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 KCTD11Q693B1 232 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 PLXDC2Q6UX71 529 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 ZNF704Q6ZNC4 412 aaPredicted RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 PDSS2Q86YH6 399 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 PLD3Q8IV08 490 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 GPALPP1Q8IXQ4 340 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 PIANPQ8IYJ0 282 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 KCTD6Q8NC69 237 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 ZCCHC10Q8TBK6 192 aa8.64□□□□□ -1.03
NEDD1-211ENST00000557454 SREK1Q8WXA9 508 aaKnown RBP8.64□□□□□ -1.03
NEDD1-211ENST00000557454 ZC3HAV1LQ96H79 300 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms