RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 SRPX2O60687 465 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 PIM1P11309 404 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 PKMP14618 531 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 FAHP16930 419 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 CHRM3P20309 590 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 TACR1P25103 407 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 HSPA7P48741 367 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 FNTAP49354 379 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 VPS41P49754 854 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 ARSFP54793 590 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 DCDP81605 110 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 TLE1Q04724 770 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 MGAT2Q10469 447 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 PMS2P11Q13670 270 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 DHX34Q14147 1143 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 SSPNQ14714 243 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 PTCHD3Q3KNS1 767 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 CTSL3PQ5NE16 218 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 FAM198BQ6UWH4 519 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 ASB18Q6ZVZ8 466 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 CENPUQ71F23 418 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 LMNTD1Q8N9Z9 388 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 OR10H5Q8NGA6 315 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 SKA2Q8WVK7 121 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 IP6K3Q96PC2 410 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 OSBPL9Q96SU4 736 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 NDC1Q9BTX1 674 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 ING2Q9H160 280 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 TXLNGQ9NUQ3 528 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 EURLQ9NYK6 297 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 CRYL1Q9Y2S2 319 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 ARGFXA6NJG6 315 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 GOLGA8KD6RF30 607 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 H3BUI4 141 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 KIF5CO60282 957 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 PHF2O75151 1096 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 KLF7O75840 302 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 CEACAM4O75871 244 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 USP1O94782 785 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 TMEM63AO94886 807 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 ONECUT2O95948 504 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 IGHEP01854 428 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 CBSLP0DN79 551 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 MAGP20916 626 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 FUT4P22083 530 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 CBSP35520 551 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 HSD17B2P37059 387 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 MAGEA3P43357 314 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 CCL11P51671 97 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 TERF1P54274 439 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 RRADP55042 308 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 DBPQ10586 325 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 THOC5Q13769 683 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 NAA25Q14CX7 972 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 MPEG1Q2M385 716 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM214AQ32MH5 1076 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 TCTE1Q5JU00 501 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 MLIPQ5VWP3 458 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 ANKRD22Q5VYY1 191 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 PAPD7Q5XG87 772 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 FIGLAQ6QHK4 219 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 NEK10Q6ZWH5 1172 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 RAB43Q86YS6 212 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 HPS6Q86YV9 775 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC35F6Q8N357 371 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 C2orf73Q8N5S3 287 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 ZBTB2Q8N680 514 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 NAT8LQ8N9F0 302 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 GLB1L3Q8NCI6 653 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 CALML6Q8TD86 181 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 NACC2Q96BF6 587 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SERPINB12Q96P63 405 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 IL17FQ96PD4 163 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 GBP5Q96PP8 586 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SLC25A23Q9BV35 468 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 TMEM120AQ9BXJ8 343 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 FAM114A2Q9NRY5 505 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 IRAK4Q9NWZ3 460 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SPATA7Q9P0W8 599 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 IFT80Q9P2H3 777 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 SNX12Q9UMY4 172 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 KLK4Q9Y5K2 254 aa9.39□□□□□ -0.91
HNRNPC-228ENST00000557033 ZCWPW2A0A1B0GU75 182 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 A0A1W2PPL8 197 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 CTAGE9A4FU28 777 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 E5RI56 91 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 K7EM74 188 aa9.38□□□□□ -0.91
HNRNPC-228ENST00000557033 KLHL41O60662 606 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms