RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FOXS1O43638 330 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 SMIM24O75264 130 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 KLHL18O94889 574 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 COL6A2P12110 1019 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 GP1BBP13224 206 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 EPB42P16452 691 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ALOX12P18054 663 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ITGA3P26006 1051 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 EMP2P54851 167 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 DLG1Q12959 904 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 MYLK4Q86YV6 388 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 TEX19Q8NA77 164 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 NT5CQ8TCD5 201 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 DCAKDQ8WVC6 231 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ESAMQ96AP7 390 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ATOH8Q96SQ7 321 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 MESP1Q9BRJ9 268 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ATP13A2Q9NQ11 1180 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 PSMC3IPQ9P2W1 217 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 C19orf25Q9UFG5 118 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 FBXL4Q9UKA2 621 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 PTBP2Q9UKA9 531 aaKnown RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 NAALAD2Q9Y3Q0 740 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 ZNF451Q9Y4E5 1061 aa13.36□□□□□ -0.27
SLIRP-207ENST00000556831 PCDHGA9Q9Y5G4 932 aaKnown RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 TNPO3Q9Y5L0 923 aaKnown RBP13.36□□□□□ -0.27
SLIRP-207ENST00000556831 IGLV3-12A0A075B6K2 115 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 HMX2A2RU54 273 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 IDSB3KWA1 339 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 PSMD12O00232 456 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 SLC28A2O43868 658 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 RDH16O75452 317 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 FAM153BP0C7A2 387 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 ZNF888P0CJ79 500 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 JAK1P23458 1154 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 TNFRSF8P28908 595 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 HNF4AP41235 474 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 XCR1P46094 333 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 MAT1AQ00266 395 aaKnown RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 TGM3Q08188 693 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 AIMP2Q13155 320 aaKnown RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 SLC29A2Q14542 456 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 FAM153CQ494X1 144 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 DEFB134Q4QY38 66 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 SLCO4C1Q6ZQN7 724 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 PTRH1Q86Y79 214 aaKnown RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 GALNT16Q8N428 558 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 AMER3Q8N944 861 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 TM9SF4Q92544 642 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 TGIF2Q9GZN2 237 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 SPNS1Q9H2V7 528 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 COPS7BQ9H9Q2 264 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-207ENST00000556831 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
SLIRP-207ENST00000556831 NSG1A0A0A6YYJ2 146 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ZNF860A6NHJ4 632 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 PDGFAP04085 211 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 TUBBP07437 444 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 SERPINA6P08185 405 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 CYC1P08574 325 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 C8orf89P0DMQ9 161 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 IL10P22301 178 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 AP2B1P63010 937 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 PHEXP78562 749 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 KLRB1Q12918 225 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 CHIT1Q13231 466 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 RAPSNQ13702 412 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 SETDB1Q15047 1291 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 SYT16Q17RD7 645 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 FAAH2Q6GMR7 532 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 TRIM40Q6P9F5 258 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ATG14Q6ZNE5 492 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 PRSS41Q7RTY9 318 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 HPS6Q86YV9 775 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ZC3H7AQ8IWR0 971 aaKnown RBP13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ARHGEF39Q8N4T4 335 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 TEX9Q8N6V9 391 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ANKRD53Q8N9V6 530 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 GAL3ST3Q96A11 431 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ISL2Q96A47 359 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 PPCSQ9HAB8 311 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 XPR1Q9UBH6 696 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 FETUBQ9UGM5 382 aa13.34□□□□□ -0.27
SLIRP-207ENST00000556831 ANAPC2Q9UJX6 822 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms