RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ANKRD20A2Q5SQ80 823 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD20A1Q5TYW2 823 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD20A3Q5VUR7 823 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF770Q6IQ21 691 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 LEKR1Q6ZMV7 388 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 GBP6Q6ZN66 633 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PIWIL3Q7Z3Z3 882 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SLC47A2Q86VL8 602 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 DZIP1Q86YF9 867 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 RCOR2Q8IZ40 523 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 LRTM2Q8N967 370 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 UXS1Q8NBZ7 420 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 GATAD1Q8WUU5 269 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 APOBEC4Q8WW27 367 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 TSACCQ96A04 125 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 EXOC4Q96A65 974 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 AZIN2Q96A70 460 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SNRNP40Q96DI7 357 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PGM2Q96G03 612 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 CDCA3Q99618 268 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PI4K2AQ9BTU6 479 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SNX25Q9H3E2 840 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 COPS7BQ9H9Q2 264 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 IARS2Q9NSE4 1012 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 MAN2C1Q9NTJ4 1040 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ARGLU1Q9NWB6 273 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SLCO1C1Q9NYB5 712 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PKD2L2Q9NZM6 624 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 OR6C2Q9NZP2 312 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PPP1R3CQ9UQK1 317 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 R4GN57 208 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 A0A0U1RQK1 487 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF320A2RRD8 509 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 MPTX1A8MV57 137 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 TMEM150CB9EJG8 249 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 PRSS46E5RG02 174 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 CCER2I3L3R5 266 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF195O14628 629 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 TEX28O15482 410 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 MELTFP08582 738 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 STAG3L1P0CL83 205 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ALDH1B1P30837 517 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 DRD3P35462 400 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OR3A1P47881 315 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 KCNJ1P48048 391 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 LEPRP48357 1165 aaKnown RBP2.5□□□□□ -2.01
SCFD1-218ENST00000556256 HNRNPA3P51991 378 aaKnown RBP2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OR1D5P58170 312 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 CSNK2BP67870 215 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 IL10RBQ08334 325 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 NFE2L1Q14494 772 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OPCMLQ14982 345 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 SLMAPQ14BN4 828 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF74Q16587 644 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 LCN1P1Q5VSP4 162 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 KLHL10Q6JEL2 608 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 CTR9Q6PD62 1173 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 BTN2A1Q7KYR7 527 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 PHLDB2Q86SQ0 1253 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 MEX3DQ86XN8 651 aaKnown RBP2.5□□□□□ -2.01
SCFD1-218ENST00000556256 SIAH3Q8IW03 269 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 C4orf19Q8IY42 314 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 PARP8Q8N3A8 854 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OR7G3Q8NG95 312 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OR7A2PQ8NGA2 310 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 OR10G8Q8NGN5 311 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 SAP25Q8TEE9 199 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 PTP4A1Q93096 173 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 SGF29Q96ES7 293 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 LPAR4Q99677 370 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 FUT8Q9BYC5 575 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF350Q9GZX5 532 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 UBQLN3Q9H347 655 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 TMEM206Q9H813 350 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 GPR132Q9UNW8 380 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 PA2G4Q9UQ80 394 aaKnown RBP2.5□□□□□ -2.01
SCFD1-218ENST00000556256 ANGPTL3Q9Y5C1 460 aa2.5□□□□□ -2.01
SCFD1-218ENST00000556256 A0A087WUV0 522 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ILVBLA1L0T0 632 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SDR42E2A6NKP2 422 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SNURFLB1AK76 121 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 NPIPA3F8WFD2 350 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 EPHB6O15197 1021 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SLC16A8O95907 504 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 MOCS2O96007 188 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SLC2A2P11168 524 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 KRT3P12035 628 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 BCL3P20749 454 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 PIK3R1P27986 724 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 SOAT1P35610 550 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 FRKP42685 505 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 IER3P46695 156 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 DNA2P51530 1060 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 ASIC1P78348 528 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 MYL7Q01449 175 aa2.49□□□□□ -2.01
SCFD1-218ENST00000556256 YWHAHQ04917 246 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 TRA2AQ13595 282 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCFD1-218ENST00000556256 TRIM29Q14134 588 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms