RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PNO1Q9NRX1 252 aaKnown RBP10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GRHPRQ9UBQ7 328 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GMEB2Q9UKD1 530 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 PACSIN3Q9UKS6 424 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 TBC1D24Q9ULP9 559 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 CLEC4AQ9UMR7 237 aa10.38□□□□□ -0.75
ACTN1-216ENST00000556083 GJE1A6NN92 205 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 MMP20O60882 483 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CREG1O75629 220 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CFL1P23528 166 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 GSK3BP49841 420 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CDH11P55287 796 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TDGQ13569 410 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CCINQ13939 588 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 MELKQ14680 651 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TGFBIQ15582 683 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TRMT10BQ6PF06 316 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 BORAQ6PGQ7 559 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 POMZP3Q6PJE2 187 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 LINGO2Q7L985 606 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 THAP6Q8TBB0 222 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 IMP4Q96G21 291 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 JSRP1Q96MG2 331 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 C11orf16Q9NQ32 467 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SPHK2Q9NRA0 654 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 HSFX1Q9UBD0 423 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 RICTORQ6R327 1708 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PRAMEF33A0A0G2JMD5 474 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 FTCDNL1E5RQL4 147 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 EMC8O43402 210 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PRAMEF10O60809 474 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PDYNP01213 254 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 FHP07954 510 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 HSDL2Q6YN16 418 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ZFAND4Q86XD8 727 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 OR4F6Q8NGB9 312 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 STON2Q8WXE9 905 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SLC22A14Q9Y267 594 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ISPDA4D126 451 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SYPP08247 313 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PGCP20142 388 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 C5AR1P21730 350 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 HTR1EP28566 365 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ACTA2P62736 377 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ACTG2P63267 376 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TMEM115Q12893 351 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 C6orf52Q5T4I8 152 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PGBD2Q6P3X8 592 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ANKRD46Q86W74 232 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PAQR7Q86WK9 346 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TM9SF4Q92544 642 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 NDRG1Q92597 394 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SMOQ99835 787 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 PTPN18Q99952 460 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 WNT7AO00755 349 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 MID1O15344 667 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TSPAN9O75954 239 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 AHSGP02765 367 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 KLK1P06870 262 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 SLC2A2P11168 524 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 GJA1P17302 382 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 S1PR1P21453 382 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 BDKRB1P46663 353 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF45Q02386 682 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 RCAN2Q14206 197 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 GRM2Q14416 872 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CWF19L1Q69YN2 538 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 NCEH1Q6PIU2 408 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF367Q7RTV3 350 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ASPGQ86U10 573 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 CBARPQ8N350 705 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ALPK1Q96QP1 1244 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 URM1Q9BTM9 101 aaKnown RBP10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ENY2Q9NPA8 101 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 IL23AQ9NPF7 189 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 ABCD2Q9UBJ2 740 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 KCNIP3Q9Y2W7 256 aa10.37□□□□□ -0.75
ACTN1-216ENST00000556083 TRBV23OR9-2A0A075B6M9 112 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 IQCF5A8MTL0 148 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 B4DGG1 531 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 M0QX08 132 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 NFKBIEO00221 500 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 TFECO14948 347 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 TGFB1P01137 390 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PRH1P02810 166 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 EDNRAP25101 427 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 MAT2AP31153 395 aaKnown RBP10.36□□□□□ -0.75
ACTN1-216ENST00000556083 GDF10P55107 478 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 MTPNP58546 118 aa10.36□□□□□ -0.75
ACTN1-216ENST00000556083 IDNKQ5T6J7 187 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms