RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TTLQ8NG68 377 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ELP5Q8TE02 316 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 UTP15Q8TED0 518 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 MOCOSQ96EN8 888 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 PEX11GQ96HA9 241 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 SMIM10Q96HG1 83 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 VPS39Q96JC1 886 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 PITHD1Q9GZP4 211 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ENTPD4Q9Y227 616 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 DYRK1BQ9Y463 629 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 PSAT1Q9Y617 370 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 LRBAP50851 2863 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 IGKV3D-11A0A0A0MRZ8 115 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 FAM95CA0A1B0GW59 222 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 OR2W5A6NFC9 320 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 A8MUI8 341 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 TTI1O43156 1089 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 CHST10O43529 356 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 ZG16O60844 167 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF888P0CJ79 500 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 GNAZP19086 355 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 PAFAH1B1P43034 410 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 OR4D2P58180 307 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC26A5P58743 744 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 RBPJQ06330 500 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 ACTN3Q08043 901 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 HYAL2Q12891 473 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 TERF2Q15554 542 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 CDKL4Q5MAI5 379 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 CYS1Q717R9 158 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 CRLF3Q8IUI8 442 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 SHISA5Q8N114 240 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 TMEM178AQ8NBL3 297 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 FBXO36Q8NEA4 188 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 OR5T3Q8NGG3 340 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 THAP3Q8WTV1 239 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 PWWP2AQ96N64 755 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 NPAS2Q99743 824 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 NAPGQ99747 312 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 SPNS1Q9H2V7 528 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 RHOJQ9H4E5 214 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 TRIM45Q9H8W5 580 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 SEC14L3Q9UDX4 400 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 IKZF3Q9UKT9 509 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC22A14Q9Y267 594 aa11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-221ENST00000555883 TCRBV16S1A1N1A0A5B0 115 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF860A6NHJ4 632 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 EFCAB8A8MWE9 144 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CDC7O00311 574 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 PRMT3O60678 531 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CDC123O75794 336 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 UNC5CO95185 931 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 F10P00742 488 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CD46P15529 392 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 MST1P26927 711 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 COL8A1P27658 744 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 GGT5P36269 586 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CD96P40200 585 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CA7P43166 264 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC6A12P48065 614 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 KCNK10P57789 538 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TAS2R39P59534 338 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 STXBP1P61764 594 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 GNG11P61952 73 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 POU4F1Q01851 419 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 PDIA2Q13087 525 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 ART3Q13508 389 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 OR1C1Q15619 314 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 RPTNQ6XPR3 784 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TMPRSS11BQ86T26 416 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 FJX1Q86VR8 437 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TCAIMQ8N3R3 496 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CREB3L4Q8TEY5 395 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TSLPQ969D9 159 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TSNARE1Q96NA8 513 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 TRIM51Q9BSJ1 452 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 NPLQ9BXD5 320 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 CAPS2Q9BXY5 557 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 DERL2Q9GZP9 239 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 EHD1Q9H4M9 534 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 NT5DC2Q9H857 520 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 GPRC5BQ9NZH0 403 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 SUCOQ9UBS9 1254 aaKnown RBP11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 MMACHCQ9Y4U1 282 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 MYO9AB2RTY4 2548 aa11.92□□□□□ -0.5
HNRNPC-221ENST00000555883 NPEPPSL1A6NEC2 478 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 SAGE2PA6NJ88 616 aa11.91□□□□□ -0.5
HNRNPC-221ENST00000555883 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms