RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RBMXL3Q8N7X1 1067 aaKnown RBP12.92□□□□□ -0.34
SNX6-203ENST00000555416 UBTD2Q8WUN7 234 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 NACC2Q96BF6 587 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 WDR34Q96EX3 536 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 PEX11GQ96HA9 241 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 SMIM10Q96HG1 83 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 MFRPQ9BY79 579 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 CNOT10Q9H9A5 744 aaKnown RBP12.92□□□□□ -0.34
SNX6-203ENST00000555416 ZNF160Q9HCG1 818 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ATP13A2Q9NQ11 1180 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 LANCL2Q9NS86 450 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 GPRC5BQ9NZH0 403 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 LUZP4Q9P127 313 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ZNF180Q9UJW8 692 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 ANAPC2Q9UJX6 822 aa12.92□□□□□ -0.34
SNX6-203ENST00000555416 IGHV1-45A0A0A0MS14 117 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 IGHV3-20A0A0C4DH32 117 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 A0A0G2JN53 185 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 CHST10O43529 356 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 CDC123O75794 336 aaPredicted RBP12.91□□□□□ -0.34
SNX6-203ENST00000555416 IPO13O94829 963 aaKnown RBP12.91□□□□□ -0.34
SNX6-203ENST00000555416 IGHEP01854 428 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 S100BP04271 92 aaPredicted RBP12.91□□□□□ -0.34
SNX6-203ENST00000555416 ABHD2P08910 425 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 ITGA3P26006 1051 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 CASRP41180 1078 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 TLE1Q04724 770 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 RGS1Q08116 209 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 KLRB1Q12918 225 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 AIMP2Q13155 320 aaKnown RBP12.91□□□□□ -0.34
SNX6-203ENST00000555416 HERC3Q15034 1050 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 ACAP2Q15057 778 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 PCOLCEQ15113 449 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 PFKFB4Q16877 469 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 FAM83EQ2M2I3 478 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 TMEM205Q6UW68 189 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 TRMT10CQ7L0Y3 403 aaKnown RBP12.91□□□□□ -0.34
SNX6-203ENST00000555416 LRRC70Q7Z2Q7 622 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 TBC1D19Q8N5T2 526 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 TEX19Q8NA77 164 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 RHEBL1Q8TAI7 183 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 ZNF451Q9Y4E5 1061 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 CSAG2Q9Y5P2 127 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
SNX6-203ENST00000555416 LOC102723996A0A087X1L8 192 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 EXOC1LA0A1B0GW35 172 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 A0A1W2PQ72 361 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 FOXO6A8MYZ6 492 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 CLGNO14967 610 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 KLK8O60259 260 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 H2AFYO75367 372 aaKnown RBP12.9□□□□□ -0.34
SNX6-203ENST00000555416 WFS1O76024 890 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SIX3O95343 332 aaPredicted RBP12.9□□□□□ -0.34
SNX6-203ENST00000555416 ZIC2O95409 532 aaPredicted RBP12.9□□□□□ -0.34
SNX6-203ENST00000555416 HPP00738 406 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SERPINA6P08185 405 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SBK3P0C264 359 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SERPINB9P50453 376 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 MLLT10P55197 1068 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 RHAGQ02094 409 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 CHIT1Q13231 466 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 E2F2Q14209 437 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 SETDB1Q15047 1291 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 IGFBP7Q16270 282 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 MINDY4Q4G0A6 757 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 FAM219BQ5XKK7 198 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 CCDC91Q7Z6B0 441 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 RNF175Q8N4F7 328 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 Q8NA96 180 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 PSMF1Q92530 271 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 TSLPQ969D9 159 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 MS4A6EQ96DS6 147 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
SNX6-203ENST00000555416 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
SNX6-203ENST00000555416 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
SNX6-203ENST00000555416 LRIT2A6NDA9 550 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 K7EPI3 171 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 KRT38O76015 456 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 CASP2P42575 452 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 BTN3A2P78410 334 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 IRF8Q02556 426 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 RUNX2Q13950 521 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 NAA30Q147X3 362 aaPredicted RBP12.89□□□□□ -0.35
SNX6-203ENST00000555416 ADPRMQ3LIE5 342 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
SNX6-203ENST00000555416 MFSD4BQ5TF39 518 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 SLC6A19Q695T7 634 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 ABHD13Q7L211 337 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 NDUFAF7Q7L592 441 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 UBE3DQ7Z6J8 389 aa12.89□□□□□ -0.35
SNX6-203ENST00000555416 KRT78Q8N1N4 520 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms