RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PAGE2Q7Z2X7 111 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 CNPPD1Q9BV87 410 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 MKRN2Q9H000 416 aaKnown RBP11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 MITFO75030 526 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 THRBP10828 461 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 PRPS2P11908 318 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 IL1RNP18510 177 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 SDC1P18827 310 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 PRPS1L1P21108 318 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 CXCR2P25025 360 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 AOAHP28039 575 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 CARTPTQ16568 116 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 MEP1AQ16819 746 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 TRIM40Q6P9F5 258 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 CEACAM20Q6UY09 585 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 DGLUCYQ7Z3D6 616 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 LSRQ86X29 649 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 CLIP4Q8N3C7 705 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 C11orf65Q8NCR3 313 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 PMEPA1Q969W9 287 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 MYADMQ96S97 322 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 C11orf16Q9NQ32 467 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 GIN1Q9NXP7 522 aa11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
ARHGEF40-206ENST00000555232 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CACNG3O60359 315 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 RCVRNP35243 200 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 HNMTP50135 292 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CLEC12AQ5QGZ9 265 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 Q6ZNX1 250 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TRPV3Q8NET8 790 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 RSPRY1Q96DX4 576 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 OSBPL11Q9BXB4 747 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SACM1LQ9NTJ5 587 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 EBF1Q9UH73 591 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 GPR45Q9Y5Y3 372 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ABCA7Q8IZY2 2146 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 B4GALT2O60909 372 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 UMPSP11172 480 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 LRP8Q14114 963 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 MPP7Q5T2T1 576 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ATAD3BQ5T9A4 648 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ANKRD34AQ69YU3 496 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ABRAXAS1Q6UWZ7 409 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 KBTBD6Q86V97 674 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ERI1Q8IV48 349 aaKnown RBP11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CENPSQ8N2Z9 138 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 Q8N9G6 341 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 USP7Q93009 1102 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 UBE2E3Q969T4 207 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 VMP1Q96GC9 406 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ASB16Q96NS5 453 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SLC12A9Q9BXP2 914 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 PRSS16Q9NQE7 514 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TBCCD1Q9NVR7 557 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 EHD3Q9NZN3 535 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ZIM2Q9NZV7 527 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SERGEFQ9UGK8 458 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 C3orf18Q9UK00 162 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CEPT1Q9Y6K0 416 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SMIM30A4D0T7 59 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 PPM1DO15297 605 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CH25HO95992 272 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 NOS3P29474 1203 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 CDKN2CP42773 168 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 BCAP31P51572 246 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 NUP107P57740 925 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SMARCD3Q6STE5 483 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 MACC1Q6ZN28 852 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 LRRC70Q7Z2Q7 622 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 COMMD6Q7Z4G1 85 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TMEM151AQ8N4L1 468 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TSTD1Q8NFU3 115 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 NETO1Q8TDF5 533 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 POPDC3Q9HBV1 291 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ACTR3BQ9P1U1 418 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 IL20RAQ9UHF4 553 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 ZNF225Q9UK10 706 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 GTF2A1LQ9UNN4 478 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 OR10H1Q9Y4A9 318 aa11.76□□□□□ -0.53
ARHGEF40-206ENST00000555232 TARM1B6A8C7 271 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 CTSKP43235 329 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 MAGEA12P43365 314 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 CSNK1DP48730 415 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 DLX2Q07687 328 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 MERTKQ12866 999 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 SYT16Q17RD7 645 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 WSCD2Q2TBF2 565 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 ZC3H14Q6PJT7 736 aaKnown RBP11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 FAM86B1Q8N7N1 296 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 ASB11Q8WXH4 323 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 HPS1Q92902 700 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 DTD2Q96FN9 168 aa11.75□□□□□ -0.53
ARHGEF40-206ENST00000555232 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms