RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 VARSP26640 1264 aaKnown RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 AHRP35869 848 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 BCL6P41182 706 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 HNF4AP41235 474 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 SCTRP47872 440 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 CCNG1P51959 295 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 EMP3P54852 163 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 PKNOX1P55347 436 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 SKP1P63208 163 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 PHEXP78562 749 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 MEF2AQ02078 507 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 RBBP5Q15291 538 aaKnown RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 RBBP7Q16576 425 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 NDUFA9Q16795 377 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 MUM1Q2TAK8 710 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 LSM12Q3MHD2 195 aaKnown RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TCHHL1Q5QJ38 904 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 WASHC2DQ5SRD0 308 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 GARNL3Q5VVW2 1013 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 FRMPD2BQ6IN97 320 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 FBXO42Q6P3S6 717 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 C6orf15Q6UXA7 325 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TMIGD1Q6UXZ0 262 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 Q6ZSR9 355 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 GPRIN3Q6ZVF9 776 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 LARP4Q71RC2 724 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TRPM8Q7Z2W7 1104 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 PLD3Q8IV08 490 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 L3MBTL4Q8NA19 623 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TRPV3Q8NET8 790 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 KIAA1143Q96AT1 154 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 WDR34Q96EX3 536 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 LRFN5Q96NI6 719 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF285Q96NJ3 590 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 C17orf62Q9BQA9 187 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 DPH2Q9BQC3 489 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 SARGQ9BW04 601 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 CCDC106Q9BWC9 280 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 ZNF385DQ9H6B1 395 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 SAR1AQ9NR31 198 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 CUTCQ9NTM9 273 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 GEMIN8Q9NWZ8 242 aaKnown RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 CCL27Q9Y4X3 112 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 TMEM184BQ9Y519 407 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-218ENST00000555213 PTGDR2Q9Y5Y4 395 aa10.4□□□□□ -0.74
SHMT2-218ENST00000555213 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 LOC105369274A0A096LPK9 316 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 LOC102723532A0A0G2JNH3 316 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 GOLGA8QA0A0J9YX86 632 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 A0A1B0GX78 115 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 HYKKA2RU49 373 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 GOLGA8OA6NCC3 632 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 URADA6NGE7 173 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CAPN14A8MX76 684 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 C9J4A7 227 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 GOLGA8NF8WBI6 632 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 FCHO1O14526 889 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 HCRTR1O43613 425 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 TIAF1O95411 115 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 DLGAP3O95886 979 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 NTRK1P04629 796 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 SERPIND1P05546 499 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CAPN1P07384 714 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 UROSP10746 265 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CD22P20273 847 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 EPHA3P29320 983 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CASP2P42575 452 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 HTR6P50406 440 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 HNRNPH2P55795 449 aaKnown RBP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CYP4F2P78329 520 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 PWP1Q13610 501 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 DOC2AQ14183 400 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 PDCD2Q16342 344 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 LACTB2Q53H82 288 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 MANEAQ5SRI9 462 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 C10orf62Q5T681 223 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 LIPJQ5W064 366 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 FAM91A1Q658Y4 838 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 GRHL2Q6ISB3 625 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 RHBDD2Q6NTF9 364 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 MED27Q6P2C8 311 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 LRRC69Q6ZNQ3 347 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CHSY3Q70JA7 882 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 MILR1Q7Z6M3 343 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 ZFAND4Q86XD8 727 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 TREML1Q86YW5 311 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHMT2-218ENST00000555213 OR4N4Q8N0Y3 316 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 IL22RA1Q8N6P7 574 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 GALNT6Q8NCL4 622 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 OR2T11Q8NH01 316 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 ACTRT2Q8TDY3 377 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 SLC13A3Q8WWT9 602 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 FAR2Q96K12 515 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 PPP1R36Q96LQ0 422 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 CCDC28BQ9BUN5 200 aa10.39□□□□□ -0.75
SHMT2-218ENST00000555213 NMUR2Q9GZQ4 415 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms