RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ALOX12P18054 663 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 TFEBP19484 476 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 GDF5P43026 501 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 XCR1P46094 333 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 EFNA3P52797 238 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 PCDH1Q08174 1060 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 Q0VFX4 171 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 HYAL2Q12891 473 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 DLG1Q12959 904 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 E2F2Q14209 437 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 SLMAPQ14BN4 828 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 PCOLCEQ15113 449 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 IRAK1BP1Q5VVH5 260 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 Q6ZS92 163 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 RAPH1Q70E73 1250 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ABHD13Q7L211 337 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 LRRC70Q7Z2Q7 622 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 TBC1D1Q86TI0 1168 aaPredicted RBP7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ISCA2Q86U28 154 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 CEP112Q8N8E3 955 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 Q8NA96 180 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 TTLQ8NG68 377 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 RHEBL1Q8TAI7 183 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ZCCHC10Q8TBK6 192 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 STAG3L4Q8TBR4 150 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 UTP15Q8TED0 518 aaKnown RBP7.11□□□□□ -1.27
LINC00640-201ENST00000554409 CREB3L4Q8TEY5 395 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 PPP4R1Q8TF05 950 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 UBTD2Q8WUN7 234 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ISL2Q96A47 359 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 C8orf44Q96CB5 159 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 WDR34Q96EX3 536 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 SMIM10Q96HG1 83 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 THOC3Q96J01 351 aaKnown RBP7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ATOH8Q96SQ7 321 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 MESP1Q9BRJ9 268 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 TUBB6Q9BUF5 446 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 YIPF2Q9BWQ6 316 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 UNKQ9C0B0 810 aaKnown RBP7.11□□□□□ -1.27
LINC00640-201ENST00000554409 VN1R1Q9GZP7 353 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF700Q9H0M5 742 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 CDC42EP4Q9H3Q1 356 aaKnown RBP7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF160Q9HCG1 818 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 DNAJC11Q9NVH1 559 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 NUDT4Q9NZJ9 180 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 CD274Q9NZQ7 290 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 HCN3Q9P1Z3 774 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 MKL2Q9ULH7 1088 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 RNF112Q9ULX5 631 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 B3GNT3Q9Y2A9 372 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 ACOT9Q9Y305 439 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 NAALAD2Q9Y3Q0 740 aa7.11□□□□□ -1.27
LINC00640-201ENST00000554409 SYCE1LA8MT33 242 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 CLGNO14967 610 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PRAMEF4O60810 478 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 RDH16O75452 317 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 JRKO75564 520 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 KLHL2O95198 593 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ALDOAP04075 364 aaKnown RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SERPINA7P05543 415 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 C2P06681 752 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PRR35P0CG20 571 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ZNF888P0CJ79 500 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ICAM2P13598 275 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 JAK1P23458 1154 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 HPDP32754 393 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SOX11P35716 441 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 KCNC1P48547 511 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 HSPA7P48741 367 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 AGTR2P50052 363 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SERPINB8P50452 374 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 MLLT10P55197 1068 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 AP2B1P63010 937 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 EEF1A2Q05639 463 aaKnown RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 MFAP5Q13361 173 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 LAPTM5Q13571 262 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 BMPR2Q13873 1038 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SLBPQ14493 270 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 RBBP5Q15291 538 aaKnown RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 TBCCQ15814 346 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PDK4Q16654 411 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 FAM83EQ2M2I3 478 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ADPRMQ3LIE5 342 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 DEFB134Q4QY38 66 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 CRB2Q5IJ48 1285 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 COLEC12Q5KU26 742 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 UBAP2Q5T6F2 1119 aaKnown RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 MROH9Q5TGP6 573 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 AGAP7PQ5VUJ5 663 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 PRAMEF9Q5VWM5 478 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 FAAH2Q6GMR7 532 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ISLR2Q6UXK2 745 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 TMIGD1Q6UXZ0 262 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 RIPOR1Q6ZS17 1223 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 KBTBD2Q8IY47 623 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 CENPLQ8N0S6 344 aaPredicted RBP7.1□□□□□ -1.27
LINC00640-201ENST00000554409 KRT78Q8N1N4 520 aa7.1□□□□□ -1.27
LINC00640-201ENST00000554409 ZADH2Q8N4Q0 377 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms