RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 MC2RQ01718 297 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CYP4F3Q08477 520 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 KRT33BQ14525 404 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 GPR19Q15760 415 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 AASDHQ4L235 1098 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 FAM71E1Q6IPT2 247 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 IGF2-ASQ6U949 168 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 COMMD6Q7Z4G1 85 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 MCATQ8IVS2 390 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM151BQ8IW70 566 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 FITM2Q8N6M3 262 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 GBP7Q8N8V2 638 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TTLQ8NG68 377 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 PROKR1Q8TCW9 393 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 MTFMTQ96DP5 389 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NMUR2Q9GZQ4 415 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SPRTNQ9H040 489 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SLC22A7Q9Y694 548 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TRPC5OSA6NMA1 111 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TGFBR3LH3BV60 316 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NDUFS4O43181 175 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 OR1F1O43749 312 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CAPNS1P04632 268 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 VIMP08670 466 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 NEFHP12036 1026 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ETV5P41161 510 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 IRX1P78414 480 aaPredicted RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TRIP6Q15654 476 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 DEFB110Q30KQ9 67 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 PDCD4Q53EL6 469 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 PAGE2BQ5JRK9 111 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CACHD1Q5VU97 1274 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 METTL21CQ5VZV1 264 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CPZQ66K79 652 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 IRGCQ6NXR0 463 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 KLHL35Q6PF15 583 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 FOXR1Q6PIV2 292 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 ASPGQ86U10 573 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 KRT78Q8N1N4 520 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 RCBTB1Q8NDN9 531 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 OR2L5Q8NG80 312 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 SREK1Q8WXA9 508 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 F2RL3Q96RI0 385 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 MRPL1Q9BYD6 325 aaKnown RBP6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TRIM55Q9BYV6 548 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 OR51B5Q9H339 312 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CLMPQ9H6B4 373 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM45AQ9NWC5 275 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 HEY2Q9UBP5 337 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 VPS29Q9UBQ0 182 aa6.42□□□□□ -1.38
LINC00517-202ENST00000554257 CELSR3Q9NYQ7 3312 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 ATP6AP2A0A1C7CYW4 349 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 CPED1A4D0V7 1026 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 CYR61O00622 381 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 HGSO14964 777 aaPredicted RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 CNOT3O75175 753 aaKnown RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 VPS4BO75351 444 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 ATP6AP2O75787 350 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 JAK1P23458 1154 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 HNRNPFP52597 415 aaKnown RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 RUNX2Q13950 521 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM35AQ53FP2 167 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 LCN10Q6JVE6 187 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 USP53Q70EK8 1073 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 MMP21Q8N119 569 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM52Q8NDY8 209 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 PPP4R1Q8TF05 950 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 SELENOMQ8WWX9 145 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GAL3ST3Q96A11 431 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TM4SF18Q96CE8 201 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 RABEP2Q9H5N1 569 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 FBXO8Q9NRD0 319 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 C1orf109Q9NX04 203 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 MCM8Q9UJA3 840 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TMED5Q9Y3A6 229 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GMEB1Q9Y692 573 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 IGLV3-12A0A075B6K2 115 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GOLGA8QA0A0J9YX86 632 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GOLGA8OA6NCC3 632 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 B4E171 279 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GOLGA8NF8WBI6 632 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 FBP2O00757 339 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 SRPX2O60687 465 aaPredicted RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 GALR3O60755 368 aaPredicted RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 DLGAP3O95886 979 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TGFB1P01137 390 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 KRT6AP02538 564 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 STATHP02808 62 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 KRT6BP04259 564 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 ZNF888P0CJ79 500 aaPredicted RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 BCKDHAP12694 445 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 CXCR2P25025 360 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 ATP5A1P25705 553 aaKnown RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 PTX3P26022 381 aaPredicted RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TIA1P31483 386 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 TSPAN7P41732 249 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 KRT6CP48668 564 aa6.41□□□□□ -1.38
LINC00517-202ENST00000554257 HNRNPH2P55795 449 aaKnown RBP6.41□□□□□ -1.38
LINC00517-202ENST00000554257 ISXQ2M1V0 245 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms