RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ATL1Q8WXF7 558 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 ZNF592Q92610 1267 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 SARGQ9BW04 601 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 SLC6A16Q9GZN6 736 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 DERL2Q9GZP9 239 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 PELI2Q9HAT8 420 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 IGSF5Q9NSI5 407 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 ANKRD10Q9NXR5 420 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 DMGDHQ9UI17 866 aaKnown RBP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 ZFP69BQ9UJL9 534 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 MYOCOSA0A1B0GUC4 107 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SH3BGRLO75368 114 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 IPO13O94829 963 aaKnown RBP17.16■□□□□ 0.34
SHMT2-206ENST00000553529 WDPCPO95876 746 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SERPINA7P05543 415 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SLC35E2BP0CK96 405 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 ALOX12P18054 663 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 MAOAP21397 527 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 HNRNPFP52597 415 aaKnown RBP17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SLC12A2P55011 1212 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 PMP22Q01453 160 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 CDC16Q13042 620 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 ZNF169Q14929 603 aaPredicted RBP17.16■□□□□ 0.34
SHMT2-206ENST00000553529 BTBD16Q32M84 506 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SFT2D3Q587I9 215 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 IRAK1BP1Q5VVH5 260 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 RNF175Q8N4F7 328 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 TMEM52Q8NDY8 209 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 OR1N1Q8NGS0 311 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SREK1Q8WXA9 508 aaKnown RBP17.16■□□□□ 0.34
SHMT2-206ENST00000553529 TAAR6Q96RI8 345 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 HES7Q9BYE0 225 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 ALG9Q9H6U8 611 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 RIC8BQ9NVN3 520 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 NSMCE4AQ9NXX6 385 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 WWOXQ9NZC7 414 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 COPG1Q9Y678 874 aaKnown RBP17.16■□□□□ 0.34
SHMT2-206ENST00000553529 SLC22A7Q9Y694 548 aa17.16■□□□□ 0.34
SHMT2-206ENST00000553529 A1L4Q6 167 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 LRRC14BA6NHZ5 514 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 A8MUA0 341 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 A8MUI8 341 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 TGFBR3LH3BV60 316 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 UBXN8O00124 270 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 SMIM10L1P0DMW3 83 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 STMN1P16949 149 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 RAB10P61026 200 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 ARG2P78540 354 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 CDKL1Q00532 357 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 ABRAXAS2Q15018 415 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 C8orf74Q6P047 294 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 ADAMTSL2Q86TH1 951 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 HPS6Q86YV9 775 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 KCTD4Q8WVF5 259 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 CCT6BQ92526 530 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 TM9SF4Q92544 642 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 CDKL2Q92772 493 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 SMIM10Q96HG1 83 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 UBXN10Q96LJ8 280 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 PSMG3-AS1Q96PY0 264 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 RAB17Q9H0T7 212 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 EPS8L2Q9H6S3 715 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 POPDC3Q9HBV1 291 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 NECTIN3Q9NQS3 549 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 NINJ2Q9NZG7 142 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 TXNDC16Q9P2K2 825 aa17.15■□□□□ 0.34
SHMT2-206ENST00000553529 ERRFI1Q9UJM3 462 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-206ENST00000553529 AGFG2O95081 481 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 C1GALT1C1LP0DN25 315 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 PPP2R1BP30154 601 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 ZNF33BQ06732 778 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 PWP1Q13610 501 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 RUNX2Q13950 521 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 FHL5Q5TD97 284 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 GPSM1Q86YR5 675 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 KLHDC8AQ8IYD2 350 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 CA13Q8N1Q1 262 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 SNX31Q8N9S9 440 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 NXNL1Q96CM4 212 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 BARD1Q99728 777 aaKnown RBP17.14■□□□□ 0.33
SHMT2-206ENST00000553529 AIF1LQ9BQI0 150 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 CD274Q9NZQ7 290 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 ZNF490Q9ULM2 529 aaPredicted RBP17.14■□□□□ 0.33
SHMT2-206ENST00000553529 KCNE2Q9Y6J6 123 aa17.14■□□□□ 0.33
SHMT2-206ENST00000553529 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
SHMT2-206ENST00000553529 WFS1O76024 890 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 UQCRHP07919 91 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 FHP07954 510 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 TFEBP19484 476 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 ECHS1P30084 290 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 AHRP35869 848 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 BTN3A2P78410 334 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 RGS1Q08116 209 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 HERC3Q15034 1050 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 NSDHLQ15738 373 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-206ENST00000553529 MROH9Q5TGP6 573 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 PAPD4Q6PIY7 484 aaKnown RBP17.13■□□□□ 0.33
SHMT2-206ENST00000553529 ISCA2Q86U28 154 aa17.13■□□□□ 0.33
SHMT2-206ENST00000553529 CRLF3Q8IUI8 442 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms