RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 REEP1Q9H902 201 aa7.1□□□□□ -1.27
BEST3-212ENST00000553096 PDP1Q9P0J1 537 aaPredicted RBP7.1□□□□□ -1.27
BEST3-212ENST00000553096 SLCO3A1Q9UIG8 710 aa7.1□□□□□ -1.27
BEST3-212ENST00000553096 PNMA8BQ9ULN7 279 aaPredicted RBP7.1□□□□□ -1.27
BEST3-212ENST00000553096 WBP11Q9Y2W2 641 aaKnown RBP7.1□□□□□ -1.27
BEST3-212ENST00000553096 DHRS7Q9Y394 339 aa7.1□□□□□ -1.27
BEST3-212ENST00000553096 PRR23AA6NEV1 266 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ATP6V1G2-DDX39BF2Z307 99 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 FFAR2O15552 330 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ZNF682O95780 498 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 LCKP06239 509 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 EBLN1P0CF75 366 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TRAPPC2P0DI81 140 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TRAPPC2BP0DI82 140 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 NR4A2P43354 598 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PRIM2P49643 509 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ITGA1P56199 1179 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PPP1R8Q12972 351 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 PTGR1Q14914 329 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 WSCD2Q2TBF2 565 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 CARD16Q5EG05 197 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.09□□□□□ -1.27
BEST3-212ENST00000553096 PSAPL1Q6NUJ1 521 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 FAHD1Q6P587 224 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 KCTD20Q7Z5Y7 419 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 DNAJB7Q7Z6W7 309 aaPredicted RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 ELMOD2Q8IZ81 293 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ATG16L2Q8NAA4 619 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 SIMC1Q8NDZ2 872 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 OR6C4Q8NGE1 309 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 OR10Z1Q8NGY1 313 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 C9orf43Q8TAL5 461 aaPredicted RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 UBTD2Q8WUN7 234 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TRIM63Q969Q1 353 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 EMILIN2Q9BXX0 1053 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 GABARAPL3Q9BY60 117 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ZBTB20Q9HC78 741 aaPredicted RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 SLC35C2Q9NQQ7 365 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 CLEC4EQ9ULY5 219 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 SAMHD1Q9Y3Z3 626 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 ASB1Q9Y576 335 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PCDHGB6Q9Y5F9 930 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 INSL5Q9Y5Q6 135 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 LYVE1Q9Y5Y7 322 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 H7C0S8 307 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 K7ERQ8 282 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 OR1I1O60431 355 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TBL1XO60907 577 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PGLSO95336 258 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 C9P02748 559 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 DBTP11182 482 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 MC4RP32245 332 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TIE1P35590 1138 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 CLDN8P56748 225 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 RPS14P62263 151 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 NPRL3Q12980 569 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 RAB33AQ14088 237 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 ZRANB3Q5FWF4 1079 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PXDC1Q5TGL8 231 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TXNDC8Q6A555 127 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 KIAA1841Q6NSI8 718 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 NCEH1Q6PIU2 408 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 CLIP4Q8N3C7 705 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ASCC1Q8N9N2 400 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 LPCAT1Q8NF37 534 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 IL17RDQ8NFM7 739 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TESCQ96BS2 214 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 HRASLS5Q96KN8 279 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 COL21A1Q96P44 957 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 EPYCQ99645 322 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 FAM126AQ9BYI3 521 aaPredicted RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 CRLF2Q9HC73 371 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 VNN3Q9NY84 501 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TBC1D14Q9P2M4 693 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 CPNE7Q9UBL6 633 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 ENOPH1Q9UHY7 261 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 PSORS1C1Q9UIG5 152 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 FBXO10Q9UK96 956 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 TRAPPC4Q9Y296 219 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 FCF1Q9Y324 198 aaKnown RBP7.09□□□□□ -1.27
BEST3-212ENST00000553096 OARD1Q9Y530 152 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 RAI2Q9Y5P3 530 aa7.09□□□□□ -1.27
BEST3-212ENST00000553096 KIAA1549LQ6ZVL6 1849 aa7.09□□□□□ -1.28
BEST3-212ENST00000553096 LRRK1Q38SD2 2015 aa7.09□□□□□ -1.28
BEST3-212ENST00000553096 PLXNA2O75051 1894 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.08□□□□□ -1.28
BEST3-212ENST00000553096 E9PQ18 207 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 STX7O15400 261 aaKnown RBP7.08□□□□□ -1.28
BEST3-212ENST00000553096 SCO2O43819 266 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 AGR2O95994 175 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 KRT6AP02538 564 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 KRT6BP04259 564 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 SEMG1P04279 462 aa7.08□□□□□ -1.28
BEST3-212ENST00000553096 GLAP06280 429 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms