RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TSPAN10Q9H1Z9 355 aaPredicted RBP21.68■■□□□ 1.06
SMARCD1-209ENST00000550477 ZNF860A6NHJ4 632 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 FCHO1O14526 889 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 CHST10O43529 356 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 PRMT3O60678 531 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 SLC25A12O75746 678 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 TSPAN12O95859 305 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 ADORA2A-AS1P86434 159 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 DEFB134Q4QY38 66 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 STRA8Q7Z7C7 330 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 RASGEF1CQ8N431 466 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 AFAP1L2Q8N4X5 818 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 AMER2Q8N7J2 671 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 ZNF740Q8NDX6 193 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 OR4K1Q8NGD4 311 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 ELP5Q8TE02 316 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 TSLPQ969D9 159 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 HES7Q9BYE0 225 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 LANCL2Q9NS86 450 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 ZFP69BQ9UJL9 534 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 SH2B3Q9UQQ2 575 aa21.67■■□□□ 1.06
SMARCD1-209ENST00000550477 B4GALT2O60909 372 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 ENO2P09104 434 aaPredicted RBP21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 ZNF24P17028 368 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 AHRP35869 848 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 CRYMQ14894 314 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 PPP1R7Q15435 360 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 CYP1B1Q16678 543 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 SPANXN3Q5MJ09 141 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 POGLUT1Q8NBL1 392 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 TRPV3Q8NET8 790 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 OR5T3Q8NGG3 340 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 ADAMTS18Q8TE60 1221 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 OLFM1Q99784 485 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 DYRK1BQ9Y463 629 aa21.66■■□□□ 1.06
SMARCD1-209ENST00000550477 KLRC4-KLRK1H3BQV0 150 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 PGRMC1O00264 195 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 NEURL1O76050 574 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 PHKG1Q16816 387 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 QSOX2Q6ZRP7 698 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 LRRC8AQ8IWT6 810 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 OR56A3Q8NH54 315 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 NT5CQ8TCD5 201 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 PHF10Q8WUB8 498 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 PYCR2Q96C36 320 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 NPAS2Q99743 824 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 DEFB126Q9BYW3 111 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 PPANQ9NQ55 473 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 COQ3Q9NZJ6 369 aa21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 CORO1CQ9ULV4 474 aaPredicted RBP21.65■■□□□ 1.06
SMARCD1-209ENST00000550477 E9PLN8 166 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 CAPN3P20807 821 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 FNTAP49354 379 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 CHTF18Q8WVB6 975 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 SLC5A11Q8WWX8 675 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 FBXL8Q96CD0 374 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 MS4A14Q96JA4 679 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 VKORC1Q9BQB6 163 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 AIF1LQ9BQI0 150 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 KLF13Q9Y2Y9 288 aaPredicted RBP21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 NEU2Q9Y3R4 380 aa21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 NCOA6Q14686 2063 aaPredicted RBP21.64■■□□□ 1.05
SMARCD1-209ENST00000550477 SAGE2PA6NJ88 616 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 NME2P1O60361 137 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 MAN1A2O60476 641 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 GUCA1CO95843 209 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 AHSGP02765 367 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 ZNF888P0CJ79 500 aaPredicted RBP21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 RNH1P13489 461 aaKnown RBP21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 NME2P22392 152 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 ST13P50502 369 aaKnown RBP21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 CDKN2DP55273 166 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 GALNT7Q86SF2 657 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 SPNS2Q8IVW8 549 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 CEP97Q8IW35 865 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 SHISA5Q8N114 240 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 AGAP11Q8TF27 550 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 CA5BP1Q8WTZ4 195 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 PRDM9Q9NQV7 894 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 PPP2R2CQ9Y2T4 447 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 VWA7Q9Y334 891 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 KCNE2Q9Y6J6 123 aa21.63■■□□□ 1.05
SMARCD1-209ENST00000550477 WISP2O76076 250 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 POU3F2P20265 443 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 TPP2P29144 1249 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 SCTRP47872 440 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 HLCSP50747 726 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 MLF1P58340 268 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 OLR1P78380 273 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 TIAL1Q01085 375 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 RBBP5Q15291 538 aaKnown RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 RBM20Q5T481 1227 aaKnown RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 FAM45BPQ6NSW5 357 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 SIAH3Q8IW03 269 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 CNTN4Q8IWV2 1026 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 AGGF1Q8N302 714 aaeCLIP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 FAM45AQ8TCE6 357 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 UTP15Q8TED0 518 aaKnown RBP21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 TRIM51Q9BSJ1 452 aa21.62■■□□□ 1.05
SMARCD1-209ENST00000550477 TRIM8Q9BZR9 551 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms