RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TMEM203Q969S6 136 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 AASSQ9UDR5 926 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 RIMKLBQ9ULI2 386 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 E2F3O00716 465 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 KMOO15229 486 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 B4GAT1O43505 415 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 MATN4O95460 622 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 POLR2CP19387 275 aaPredicted RBP14.46□□□□□ -0.09
CUX1-214ENST00000550008 RCAN2Q14206 197 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 SELPLGQ14242 412 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 ATP6AP1Q15904 470 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 ITPRIPL2Q3MIP1 535 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 ZBED5Q49AG3 693 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 CRB2Q5IJ48 1285 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 LIPJQ5W064 366 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 CCDC80Q76M96 950 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 PARS2Q7L3T8 475 aaKnown RBP14.46□□□□□ -0.09
CUX1-214ENST00000550008 CROCCP3Q8IVE0 287 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 MARVELD2Q8N4S9 558 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 OXR1Q8N573 874 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 AQP11Q8NBQ7 271 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 DNAJB8Q8NHS0 232 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 FRS2Q8WU20 508 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 OR51V1Q9H2C8 321 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 TMEM181Q9P2C4 612 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 DNMT3BQ9UBC3 853 aaKnown RBP14.46□□□□□ -0.09
CUX1-214ENST00000550008 BTBD3Q9Y2F9 522 aa14.46□□□□□ -0.09
CUX1-214ENST00000550008 ZNF99A8MXY4 864 aaPredicted RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 APOL3O95236 402 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 PRLP01236 227 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 ADRB3P13945 408 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 MC1RQ01726 317 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 LRRC26Q2I0M4 334 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 AMZ1Q400G9 498 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 CACTIN-AS1Q8N1I8 211 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 NETO1Q8TDF5 533 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 BORCS5Q969J3 196 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 TEX37Q96LM6 180 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 A0A096LPI6 279 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 SMIM30A4D0T7 59 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 CRISP3P54108 245 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 TOR1AIP1Q5JTV8 583 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 UBE2J2Q8N2K1 259 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 OR2T11Q8NH01 316 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 ZNF671Q8TAW3 534 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 MYRFLQ96LU7 910 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 BIRC8Q96P09 236 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 SSR3Q9UNL2 185 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 LOXHD1Q8IVV2 1947 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 MTHFD2P13995 350 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 MYOGP15173 224 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 SDC1P18827 310 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 RAPSNQ13702 412 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 LARS2Q15031 903 aaKnown RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 ANGPT1Q15389 498 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 LCN8Q6JVE9 175 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 NEIL2Q969S2 332 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 TRMT2BQ96GJ1 504 aaKnown RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 FCRL4Q96PJ5 515 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 TBX5Q99593 518 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 CDC14AQ9UNH5 594 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 MRPS33Q9Y291 106 aaKnown RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 ASB1Q9Y576 335 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 OR52A4PA6NMU1 304 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 JAK1P23458 1154 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 GTF2E2P29084 291 aaKnown RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 LIPIQ6XZB0 460 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 BHLHA9Q7RTU4 235 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 FUNDC1Q8IVP5 155 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 COX18Q8N8Q8 333 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 ENKURQ8TC29 256 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 POP5Q969H6 163 aaKnown RBP14.45□□□□□ -0.1
CUX1-214ENST00000550008 GAL3ST4Q96RP7 486 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 SERHL2Q9H4I8 314 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 SERHLQ9NQF3 203 aa14.45□□□□□ -0.1
CUX1-214ENST00000550008 PRR23D1E9PI22 279 aaPredicted RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 TSC22D2O75157 780 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 SNX4O95219 450 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 NPPAP01160 153 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 PRR23D2P0DMB1 279 aaPredicted RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 ANXA8P13928 327 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 SOX9P48436 509 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 TUBB3Q13509 450 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 RUNX3Q13761 415 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 TRIM71Q2Q1W2 868 aaKnown RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 FBXO46Q6PJ61 603 aaPredicted RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 Q6ZSR9 355 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 COMMD6Q7Z4G1 85 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 TUBB1Q9H4B7 451 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 TMA7Q9Y2S6 64 aaKnown RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 SEC16AO15027 2179 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 ATP6V1G1O75348 118 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 TIMP2P16035 220 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 CD9P21926 228 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 MPIP34949 423 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 IRS1P35568 1242 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 ZNF234Q14588 700 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 ADGRG5Q8IZF4 528 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 OR2A12Q8NGT7 310 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 FAR1Q8WVX9 515 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms