RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CXCR5P32302 372 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 AP1S2P56377 157 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 OR4D2P58180 307 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 TIAL1Q01085 375 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 OC90Q02509 493 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 DHX9Q08211 1270 aaKnown RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 HSP90AA5PQ58FG0 334 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 DUPD1Q68J44 220 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 TTC27Q6P3X3 843 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 GALNTL5Q7Z4T8 443 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 RPS19BP1Q86WX3 136 aaKnown RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ARMC10Q8N2F6 343 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 AGGF1Q8N302 714 aaeCLIP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF740Q8NDX6 193 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 MAGOHBQ96A72 148 aaKnown RBP12.07□□□□□ -0.48
PTCH1-218ENST00000548945 PEX11GQ96HA9 241 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 HIST1H2AHQ96KK5 128 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 HIST1H2AJQ99878 128 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 SPOCK3Q9BQ16 436 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 H2AFJQ9BTM1 129 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ATG10Q9H0Y0 220 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ANKRD10Q9NXR5 420 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 NPIPA1Q9UND3 350 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 NEU2Q9Y3R4 380 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
PTCH1-218ENST00000548945 E9PLN8 166 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 GOLGA8MH3BSY2 632 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NDUFS4O43181 175 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NME2P1O60361 137 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 SLC25A12O75746 678 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 CDC123O75794 336 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 TTC4O95801 387 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 TSPAN12O95859 305 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 SNRPB2P08579 225 aaKnown RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ABOP16442 354 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF24P17028 368 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ALOX12P18054 663 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 PGAM1P18669 254 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NME2P22392 152 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 TRHRP34981 398 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 AHRP35869 848 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 CYB561P49447 251 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 CYP1B1Q16678 543 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 KCTD19Q17RG1 926 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 MBOAT1Q6ZNC8 495 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 QSOX2Q6ZRP7 698 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 KIAA0408Q6ZU52 694 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ABHD13Q7L211 337 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 GALNT7Q86SF2 657 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 RASGEF1CQ8N431 466 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 POGLUT1Q8NBL1 392 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ACBD4Q8NC06 268 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 OR5T3Q8NGG3 340 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 OR56A3Q8NH54 315 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NT5CQ8TCD5 201 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 ATL1Q8WXF7 558 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 TSLPQ969D9 159 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 SNF8Q96H20 258 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 NAP1L3Q99457 506 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 VKORC1Q9BQB6 163 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 TSPAN10Q9H1Z9 355 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 CDCP1Q9H5V8 836 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 IARS2Q9NSE4 1012 aaKnown RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
PTCH1-218ENST00000548945 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
PTCH1-218ENST00000548945 HCFC1P51610 2035 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 NIPBLQ6KC79 2804 aaeCLIP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PABPN1LA6NDY0 278 aaKnown RBP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 URADA6NGE7 173 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 ZNF860A6NHJ4 632 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PRRG2O14669 202 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 CHST10O43529 356 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 OR1F1O43749 312 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PRMT3O60678 531 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 TPP2P29144 1249 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 MLF1P58340 268 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 IL2P60568 153 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 RGS1Q08116 209 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 CRYMQ14894 314 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 MAPKAPK3Q16644 382 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PHKG1Q16816 387 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 DEFB134Q4QY38 66 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 CCDC137Q6PK04 289 aaKnown RBP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PAQR3Q6TCH7 311 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 DOLPP1Q86YN1 238 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 CNTN4Q8IWV2 1026 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 CHERPQ8IWX8 916 aaKnown RBP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 C17orf53Q8N3J3 647 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-218ENST00000548945 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 TMEM125Q96AQ2 219 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 FBXL8Q96CD0 374 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 LINGO1Q96FE5 620 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 PBKQ96KB5 322 aa12.05□□□□□ -0.48
PTCH1-218ENST00000548945 DMRTA2Q96SC8 542 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms