RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CHRNB1P11230 501 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 AOAHP28039 575 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 GKP32189 559 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 HNF4AP41235 474 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 SEMG2Q02383 582 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF79Q15937 498 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 PPP2R2DQ66LE6 453 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 LAX1Q8IWV1 398 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 L3MBTL4Q8NA19 623 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 FLCNQ8NFG4 579 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 OR8J2Q8NGG1 315 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 WDR36Q8NI36 951 aaKnown RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 SETD6Q8TBK2 473 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 LINC01599Q8WXQ3 324 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 COPS8Q99627 209 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 MMP28Q9H239 520 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 OGDHLQ9ULD0 1010 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 SLC22A14Q9Y267 594 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 MEIOCA2RUB1 952 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 PRAMEF25A6NGN4 478 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 UGT2B17O75795 530 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 RPS19P39019 145 aaKnown RBP13.2□□□□□ -0.3
HDAC7-228ENST00000548938 TGM4P49221 684 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 DGKEP52429 567 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 DDX39BQ13838 428 aaKnown RBP13.2□□□□□ -0.3
HDAC7-228ENST00000548938 RGNQ15493 299 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 FAM209AQ5JX71 171 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 NAGSQ8N159 534 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 WBP2Q969T9 261 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 GTPBP3Q969Y2 492 aaKnown RBP13.2□□□□□ -0.3
HDAC7-228ENST00000548938 ZFYVE19Q96K21 471 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 HTATIP2Q9BUP3 242 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 CDCA4Q9BXL8 241 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 PCDHGB2Q9Y5G2 931 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 J3KTA2 159 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 TRBC1P01850 177 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 ANXA8P13928 327 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 CD72P21854 359 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 PCGF2P35227 344 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 SOX3P41225 446 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 SLC6A12P48065 614 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 ARPC4P59998 168 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 TEKQ02763 1124 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 SMARCB1Q12824 385 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 MICAQ29983 383 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 CCDC58Q4VC31 144 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 Q5BKY6 102 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 TOR1AIP1Q5JTV8 583 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 VN1R5Q7Z5H4 357 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 C9orf43Q8TAL5 461 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-228ENST00000548938 RNF170Q96K19 258 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 FCRL1Q96LA6 429 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
HDAC7-228ENST00000548938 DUSP26Q9BV47 211 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 KCTD5Q9NXV2 234 aa13.2□□□□□ -0.3
HDAC7-228ENST00000548938 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 C1orf226A1L170 272 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 EFCAB10A6NFE3 127 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 AGRPO00253 132 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 IL7P13232 177 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 ITGA2P17301 1181 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 ATF6P18850 670 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 CCR7P32248 378 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 SELENOWP63302 87 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 GALK2Q01415 458 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 CHIT1Q13231 466 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 SLC24A5Q71RS6 500 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 FYTTD1Q96QD9 318 aaKnown RBP13.19□□□□□ -0.3
HDAC7-228ENST00000548938 GDF15Q99988 308 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 BEX2Q9BXY8 128 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 GPR62Q9BZJ7 368 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 HHATLQ9HCP6 504 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 RANGRFQ9HD47 186 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-228ENST00000548938 TIGARQ9NQ88 270 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 SLC38A8A6NNN8 435 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 INPPL1O15357 1258 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 PRMT3O60678 531 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 ALX3O95076 343 aa13.19□□□□□ -0.3
HDAC7-228ENST00000548938 ABCB1P08183 1280 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-228ENST00000548938 CHRNEQ04844 493 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms