RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 MLXIPLQ9NP71 852 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 ANAPC2Q9UJX6 822 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 SLC22A7Q9Y694 548 aa14.92□□□□□ -0.02
DDX54-205ENST00000548786 NSG1A0A0A6YYJ2 146 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 TRIM49D1C9J1S8 452 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 GALR3O60755 368 aaPredicted RBP14.91□□□□□ -0.02
DDX54-205ENST00000548786 KLHL2O95198 593 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 CELA2AP08217 269 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 COX6A1P12074 109 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 EPORP19235 508 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 CD97P48960 835 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 CSRP3P50461 194 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 HYAL2Q12891 473 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 CHIT1Q13231 466 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 IGFBP7Q16270 282 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 PFKFB4Q16877 469 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 CDKL4Q5MAI5 379 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 VWA5B1Q5TIE3 1220 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 IRAK1BP1Q5VVH5 260 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 KLC3Q6P597 504 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 KRT78Q8N1N4 520 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 TRPV3Q8NET8 790 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 UTP15Q8TED0 518 aaKnown RBP14.91□□□□□ -0.02
DDX54-205ENST00000548786 CREB3L4Q8TEY5 395 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 THOC3Q96J01 351 aaKnown RBP14.91□□□□□ -0.02
DDX54-205ENST00000548786 SCYL1Q96KG9 808 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 SLC6A16Q9GZN6 736 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 AICDAQ9GZX7 198 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 GPRC5BQ9NZH0 403 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 OPTCQ9UBM4 332 aa14.91□□□□□ -0.02
DDX54-205ENST00000548786 SYCE1LA8MT33 242 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 RIPK2O43353 540 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 CHST10O43529 356 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 SH3BGRLO75368 114 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 KRT38O76015 456 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 HPP00738 406 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 ALPPP05187 535 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 UQCRHP07919 91 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 C8orf89P0DMQ9 161 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 MYBL2P10244 700 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 MTHFD2P13995 350 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 CD22P20273 847 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 HNRNPH1P31943 449 aaKnown RBP14.9□□□□□ -0.02
DDX54-205ENST00000548786 SERPINB9P50453 376 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 IRF8Q02556 426 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 LRRC70Q7Z2Q7 622 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 MYLK4Q86YV6 388 aaPredicted RBP14.9□□□□□ -0.02
DDX54-205ENST00000548786 AFAP1L2Q8N4X5 818 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 TEX9Q8N6V9 391 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 RBMXL3Q8N7X1 1067 aaKnown RBP14.9□□□□□ -0.02
DDX54-205ENST00000548786 METTL21AQ8WXB1 218 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 NACC2Q96BF6 587 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 VPS50Q96JG6 964 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 GPR78Q96P69 363 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 SMAD5Q99717 465 aaKnown RBP14.9□□□□□ -0.02
DDX54-205ENST00000548786 CAPS2Q9BXY5 557 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 ZNF552Q9H707 407 aaPredicted RBP14.9□□□□□ -0.02
DDX54-205ENST00000548786 ANGPTL3Q9Y5C1 460 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 MYO18BQ8IUG5 2567 aa14.9□□□□□ -0.02
DDX54-205ENST00000548786 SCN2AQ99250 2005 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 IGHV1-45A0A0A0MS14 117 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 ANKDD1BA6NHY2 528 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 TTLL8A6PVC2 850 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 K7EPI3 171 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 ERI3O43414 337 aaKnown RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 DPM1O60762 260 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 B4GALT2O60909 372 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 SEC24DO94855 1032 aaPredicted RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 SERPINA6P08185 405 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 PCNAP12004 261 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 PLA2G16P53816 162 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 BTN3A2P78410 334 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 ACAP2Q15057 778 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 PRR30Q53SZ7 412 aaPredicted RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 TECRLQ5HYJ1 363 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 LINC00696Q6ZRV3 163 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 TRMT10CQ7L0Y3 403 aaKnown RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 NDUFAF7Q7L592 441 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 VN1R5Q7Z5H4 357 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 CCDC91Q7Z6B0 441 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 RHEBL1Q8TAI7 183 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 UBTD2Q8WUN7 234 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 TSLPQ969D9 159 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 PTCD3Q96EY7 689 aaKnown RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 MAGEB10Q96LZ2 347 aaPredicted RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 LHPPQ9H008 270 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 L2HGDHQ9H9P8 463 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 ZNF490Q9ULM2 529 aaPredicted RBP14.89□□□□□ -0.03
DDX54-205ENST00000548786 PLAAQ9Y263 795 aa14.89□□□□□ -0.03
DDX54-205ENST00000548786 URADA6NGE7 173 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 FAM227AF5H4B4 570 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 SIX3O95343 332 aaPredicted RBP14.88□□□□□ -0.03
DDX54-205ENST00000548786 FHP07954 510 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 ABHD2P08910 425 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 GCAP28676 217 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 MAGEA12P43365 314 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 STXBP1P61764 594 aaKnown RBP14.88□□□□□ -0.03
DDX54-205ENST00000548786 SLC29A2Q14542 456 aa14.88□□□□□ -0.03
DDX54-205ENST00000548786 ABRAXAS2Q15018 415 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms