RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 GTF3C1Q12789 2109 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 TRBC2A0A5B9 178 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 A8MUA0 341 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 CHST10O43529 356 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 GALR3O60755 368 aaPredicted RBP19.12■□□□□ 0.65
SSH1-207ENST00000547862 ABOP16442 354 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 ALOX12P18054 663 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 JAK1P23458 1154 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 FNTAP49354 379 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 IL2P60568 153 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 ZNF630Q2M218 657 aaPredicted RBP19.12■□□□□ 0.65
SSH1-207ENST00000547862 ZXDCQ2QGD7 858 aaPredicted RBP19.12■□□□□ 0.65
SSH1-207ENST00000547862 MSS51Q4VC12 460 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 ZNF468Q5VIY5 522 aaPredicted RBP19.12■□□□□ 0.65
SSH1-207ENST00000547862 DUPD1Q68J44 220 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 TMPRSS11BQ86T26 416 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 TBC1D19Q8N5T2 526 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 CERS2Q96G23 380 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 SNF8Q96H20 258 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 OR4K3Q96R72 315 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 TRIM54Q9BYV2 358 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 LRFN1Q9P244 771 aa19.12■□□□□ 0.65
SSH1-207ENST00000547862 DNALI1O14645 258 aaPredicted RBP19.11■□□□□ 0.65
SSH1-207ENST00000547862 TSPAN12O95859 305 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 AHSGP02765 367 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 MAOAP21397 527 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 SAT1P21673 171 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 TPP2P29144 1249 aaPredicted RBP19.11■□□□□ 0.65
SSH1-207ENST00000547862 RAB8AP61006 207 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 SKP1P63208 163 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 CSHL1Q14406 222 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 HECTD2Q5U5R9 776 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 C3P1Q6ZMU1 363 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 ABHD13Q7L211 337 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 PCGF5Q86SE9 256 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 SLC35F6Q8N357 371 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 PLPP5Q8NEB5 264 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 OR56A3Q8NH54 315 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 SLC5A11Q8WWX8 675 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 NEIL2Q969S2 332 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 PTCHD1Q96NR3 888 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 OSBPL9Q96SU4 736 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 OLFM1Q99784 485 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 FAM129AQ9BZQ8 928 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 CHST11Q9NPF2 352 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 CHMP2BQ9UQN3 213 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 DYRK1BQ9Y463 629 aa19.11■□□□□ 0.65
SSH1-207ENST00000547862 CTAGE15A4D2H0 777 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 PSMD12O00232 456 aaPredicted RBP19.1■□□□□ 0.65
SSH1-207ENST00000547862 SLC25A12O75746 678 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 NEURL1O76050 574 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 TTC4O95801 387 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 SP1P08047 785 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 ZNF24P17028 368 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 SMSP52788 366 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 AP1S2P56377 157 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 BTG2P78543 158 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 SLC25A25Q6KCM7 469 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 CTAGE6Q86UF2 777 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 RPS19BP1Q86WX3 136 aaKnown RBP19.1■□□□□ 0.65
SSH1-207ENST00000547862 IGDCC3Q8IVU1 814 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 AFAP1L2Q8N4X5 818 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 CPSF7Q8N684 471 aaKnown RBP19.1■□□□□ 0.65
SSH1-207ENST00000547862 HORMAD2Q8N7B1 307 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 ABHD11Q8NFV4 315 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 FBXL8Q96CD0 374 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 DDX47Q9H0S4 455 aaKnown RBP19.1■□□□□ 0.65
SSH1-207ENST00000547862 IKZF3Q9UKT9 509 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 PCDHGB6Q9Y5F9 930 aa19.1■□□□□ 0.65
SSH1-207ENST00000547862 TEP1Q99973 2627 aaKnown RBP19.09■□□□□ 0.65
SSH1-207ENST00000547862 ASPDHA6ND91 283 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 NPEPPSL1A6NEC2 478 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 C19orf84I3L1E1 186 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 PRMT3O60678 531 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 IL10P22301 178 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 PTGER4P35408 488 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 REEP5Q00765 189 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 HYAL2Q12891 473 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 PWP1Q13610 501 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 RBBP5Q15291 538 aaKnown RBP19.09■□□□□ 0.65
SSH1-207ENST00000547862 CDSNQ15517 529 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 TOR1AIP1Q5JTV8 583 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 FAM45BPQ6NSW5 357 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 XKRXQ6PP77 449 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 SPPL2CQ8IUH8 684 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 CNTN4Q8IWV2 1026 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 NT5CQ8TCD5 201 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 FAM45AQ8TCE6 357 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 UTP15Q8TED0 518 aaKnown RBP19.09■□□□□ 0.65
SSH1-207ENST00000547862 THAP3Q8WTV1 239 aaPredicted RBP19.09■□□□□ 0.65
SSH1-207ENST00000547862 ATL1Q8WXF7 558 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 PWWP2AQ96N64 755 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 OTOGQ6ZRI0 2925 aa19.09■□□□□ 0.65
SSH1-207ENST00000547862 SAGE2PA6NJ88 616 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 RFC3P40938 356 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 SCTRP47872 440 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 ITGA8P53708 1063 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 ZNF460Q14592 562 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 KRTCAP3Q53RY4 240 aa19.08■□□□□ 0.64
SSH1-207ENST00000547862 TEDDM1Q5T9Z0 273 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms