RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ZNF256Q9Y2P7 627 aaPredicted RBP3.03□□□□□ -1.92
CCDC38-204ENST00000546816 HMGB1P1B2RPK0 211 aaPredicted RBP3.02□□□□□ -1.93
CCDC38-204ENST00000546816 TNFSF12O43508 249 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 VENTXO95231 258 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 ADORA3P0DMS8 318 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 IL11P20809 199 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 ZBTB25P24278 435 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 ITPK1Q13572 414 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 CAPRIN1Q14444 709 aaKnown RBP3.02□□□□□ -1.93
CCDC38-204ENST00000546816 BECN1Q14457 450 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 KRT39Q6A163 491 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 OR5M9Q8NGP3 310 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 GDAP1L1Q96MZ0 367 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 SPATA33Q96N06 139 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 LRRCC1Q9C099 1032 aa3.02□□□□□ -1.93
CCDC38-204ENST00000546816 XAB2Q9HCS7 855 aaKnown RBP3.02□□□□□ -1.93
CCDC38-204ENST00000546816 UMODL1Q5DID0 1318 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 RNF123Q5XPI4 1314 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 H3BMM5 538 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 SEMA4FO95754 770 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 FAM200BP0CF97 657 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 GIFP27352 417 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 ELK3P41970 407 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 RAB28P51157 221 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 RIDAP52758 137 aaKnown RBP3.01□□□□□ -1.93
CCDC38-204ENST00000546816 MTCP1P56278 107 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 CLDN17P56750 224 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 Q1RN00 199 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 ATAD3CQ5T2N8 411 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 CFAP58Q5T655 872 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 ERMARDQ5T6L9 678 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 TTC27Q6P3X3 843 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 DHRS11Q6UWP2 260 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 PIGWQ7Z7B1 504 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 HSCBQ8IWL3 235 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 DND1Q8IYX4 353 aaKnown RBP3.01□□□□□ -1.93
CCDC38-204ENST00000546816 P2RX5Q93086 422 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 FZD8Q9H461 694 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 WDR35Q9P2L0 1181 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 NAALAD2Q9Y3Q0 740 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 TTLL3Q9Y4R7 772 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 POGZQ7Z3K3 1410 aa3.01□□□□□ -1.93
CCDC38-204ENST00000546816 TRGV8A0A0C4DH27 118 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 FAM168BA1KXE4 195 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 RECQL5O94762 991 aaPredicted RBP3□□□□□ -1.93
CCDC38-204ENST00000546816 STAG3L1P0CL83 205 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 FDPSP14324 419 aaKnown RBP3□□□□□ -1.93
CCDC38-204ENST00000546816 CAPZA2P47755 286 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 LYZP61626 148 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 RUNX3Q13761 415 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 KNOP1Q1ED39 458 aaKnown RBP3□□□□□ -1.93
CCDC38-204ENST00000546816 TMUB2Q71RG4 321 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 PRUNE1Q86TP1 453 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 HIPK1Q86Z02 1210 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 PARP8Q8N3A8 854 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 PRSS35Q8N3Z0 413 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 CCDC63Q8NA47 563 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 ITLN1Q8WWA0 313 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 HDAC11Q96DB2 347 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 SERAC1Q96JX3 654 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 RBM24Q9BX46 236 aaKnown RBP3□□□□□ -1.93
CCDC38-204ENST00000546816 FNDC4Q9H6D8 234 aaPredicted RBP3□□□□□ -1.93
CCDC38-204ENST00000546816 MOB1AQ9H8S9 216 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 NYAP2Q9P242 653 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 POLLQ9UGP5 575 aa3□□□□□ -1.93
CCDC38-204ENST00000546816 SALL1Q9NSC2 1324 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 RALGAPA1Q6GYQ0 2036 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 E9PAM4 449 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 SIGLEC5O15389 551 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 KIF5CO60282 957 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 MT-ND1P03886 318 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 ADRB2P07550 413 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 MYL6BP14649 208 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 FEN1P39748 380 aaKnown RBP2.99□□□□□ -1.93
CCDC38-204ENST00000546816 CST9LP1Q5W188 147 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 KRT80Q6KB66 452 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 EMBQ6PCB8 327 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 AMIGO1Q86WK6 493 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 APCDD1Q8J025 514 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 TEX26Q8N6G2 289 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 PI4KAP1Q8N8J0 262 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 EXT2Q93063 718 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 ZNF558Q96NG5 402 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 MARCH7Q9H992 704 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 IARS2Q9NSE4 1012 aaKnown RBP2.99□□□□□ -1.93
CCDC38-204ENST00000546816 AUP1Q9Y679 476 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 COLEC10Q9Y6Z7 277 aa2.99□□□□□ -1.93
CCDC38-204ENST00000546816 A8MU76 341 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 INPP4BO15327 924 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 MT-ND2P03891 347 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 FYNP06241 537 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 MYBL1P10243 752 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 TCF4P15884 667 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 ZNF19P17023 458 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 EPORP19235 508 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 CPT2P23786 658 aa2.98□□□□□ -1.93
CCDC38-204ENST00000546816 ACAT1P24752 427 aaKnown RBP2.98□□□□□ -1.93
CCDC38-204ENST00000546816 CYLC2Q14093 348 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms