RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ADPRM	Q3LIE5	342 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	DEFB134	Q4QY38	66 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	PLAG1	Q6DJT9	500 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	RPUSD3	Q6P087	351 aa	Known RBP	12.64	□□□□□ -0.39
POLE-222	ENST00000545015	TMIGD1	Q6UXZ0	262 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.64	□□□□□ -0.39
POLE-222	ENST00000545015	CTAGE6	Q86UF2	777 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	CUZD1	Q86UP6	607 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	SHISA5	Q8N114	240 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	KRT78	Q8N1N4	520 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	SPATA6L	Q8N4H0	392 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	RHEBL1	Q8TAI7	183 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	HAS2	Q92819	552 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	TBC1D20	Q96BZ9	403 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	SNRNP40	Q96DI7	357 aa	Known RBP	12.64	□□□□□ -0.39
POLE-222	ENST00000545015	ATOH8	Q96SQ7	321 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.64	□□□□□ -0.39
POLE-222	ENST00000545015	ACSS3	Q9H6R3	686 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	NMRAL1	Q9HBL8	299 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	IGSF5	Q9NSI5	407 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	WWOX	Q9NZC7	414 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	NUDT4	Q9NZJ9	180 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	MTRF1L	Q9UGC7	380 aa	Known RBP	12.64	□□□□□ -0.39
POLE-222	ENST00000545015	VPS4A	Q9UN37	437 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	DOCK10	Q96BY6	2186 aa		12.64	□□□□□ -0.39
POLE-222	ENST00000545015	SHANK1	Q9Y566	2161 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CHST10	O43529	356 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	PRAMEF4	O60810	478 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	KERA	O60938	352 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CLEC3A	O75596	197 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	FH	P07954	510 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	LTA4H	P09960	611 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CTAGE8	P0CG41	777 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	ZNF888	P0CJ79	500 aa	Predicted RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	JAK1	P23458	1154 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	PHB	P35232	272 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	STXBP1	P61764	594 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	UBAP2L	Q14157	1087 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	SLBP	Q14493	270 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.63	□□□□□ -0.39	2e-8	■■□□□ 13.1
POLE-222	ENST00000545015	RBBP5	Q15291	538 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	TLR1	Q15399	786 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	MINDY4	Q4G0A6	757 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	PRR30	Q53SZ7	412 aa	Predicted RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	PRAMEF9	Q5VWM5	478 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	FAAH2	Q6GMR7	532 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	H3F3C	Q6NXT2	135 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	QSOX2	Q6ZRP7	698 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	LRRC70	Q7Z2Q7	622 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	ANKRD37	Q7Z713	158 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CMC1	Q7Z7K0	106 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CTAGE4	Q8IX94	777 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	FAM26E	Q8N5C1	309 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	NOA1	Q8NC60	698 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	BRIX1	Q8TDN6	353 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	UBTD2	Q8WUN7	234 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	GAL3ST3	Q96A11	431 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	PTCD3	Q96EY7	689 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	EFCAB11	Q9BUY7	163 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	SLC29A3	Q9BZD2	475 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CD244	Q9BZW8	370 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	UNK	Q9C0B0	810 aa	Known RBP	12.63	□□□□□ -0.39
POLE-222	ENST00000545015	AICDA	Q9GZX7	198 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	RHBG	Q9H310	441 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	NINJ2	Q9NZG7	142 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	RNF112	Q9ULX5	631 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	ACOT9	Q9Y305	439 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015	CSAG2	Q9Y5P2	127 aa		12.63	□□□□□ -0.39
POLE-222	ENST00000545015		A0A087X1B8	175 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	NCF1B	A6NI72	391 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	NCF1C	A8MVU1	366 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	CDK2AP1	O14519	115 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	CLGN	O14967	610 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	TBX6	O95947	436 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	MTHFD2	P13995	350 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	NCF1	P14598	390 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	EPOR	P19235	508 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	TFEB	P19484	476 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	ECHS1	P30084	290 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	HPD	P32754	393 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	HSPA7	P48741	367 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	ZNF169	Q14929	603 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	SLMAP	Q14BN4	828 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	EXT1	Q16394	746 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	PDK4	Q16654	411 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	LANCL3	Q6ZV70	420 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	RAPH1	Q70E73	1250 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	CENPL	Q8N0S6	344 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	OR5T3	Q8NGG3	340 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	DNAJB14	Q8TBM8	379 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	M1AP	Q8TC57	530 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	ISL2	Q96A47	359 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	PEX11G	Q96HA9	241 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	FMO2	Q99518	471 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	NPL	Q9BXD5	320 aa	Predicted RBP	12.62	□□□□□ -0.39
POLE-222	ENST00000545015	KLHL31	Q9H511	634 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	CD274	Q9NZQ7	290 aa		12.62	□□□□□ -0.39
POLE-222	ENST00000545015	LUZP4	Q9P127	313 aa		12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms