RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 FBXO43Q4G163 708 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 C10orf62Q5T681 223 aaPredicted RBP5.59□□□□□ -1.52
VPS50-220ENST00000544910 FOXB2Q5VYV0 432 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 GRHL2Q6ISB3 625 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 NUDT13Q86X67 352 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 RNF130Q86XS8 419 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 TCEAL8Q8IYN2 117 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 PROKR1Q8TCW9 393 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 FBXL8Q96CD0 374 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 ZBED6CLQ96FA7 236 aaPredicted RBP5.59□□□□□ -1.52
VPS50-220ENST00000544910 SCRN2Q96FV2 425 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 ERMAPQ96PL5 475 aaPredicted RBP5.59□□□□□ -1.52
VPS50-220ENST00000544910 DOHHQ9BU89 302 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 RAB11FIP5Q9BXF6 653 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 TRPV5Q9NQA5 729 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 CREBZFQ9NS37 354 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 MAP10Q9P2G4 905 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 TRBC2A0A5B9 178 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TTC34A8MYJ7 566 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 H3BMQ9 156 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TLR4O00206 839 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 UGDHO60701 494 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 RB1P06400 928 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FAUP35544 74 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 MAP2K4P45985 399 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ARL4DP49703 201 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ENTPD1P49961 510 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CDK6Q00534 326 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 C6orf183Q5T699 404 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TMEM53Q6P2H8 277 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SLC39A5Q6ZMH5 540 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 HTR3DQ70Z44 454 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GATAD2AQ86YP4 633 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FUNDC1Q8IVP5 155 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 IZUMO1Q8IYV9 350 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GJD3Q8N144 294 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GPR26Q8NDV2 337 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 PHC3Q8NDX5 983 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 MOSPD2Q8NHP6 518 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 C9orf43Q8TAL5 461 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 LKAAEAR1Q8TD35 194 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 COG8Q96MW5 612 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CLSTN3Q9BQT9 956 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CRISPLD1Q9H336 500 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ERVK-18Q9QC07 812 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 PLAGL1Q9UM63 463 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SLC1A7O00341 560 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TEX28O15482 410 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ADAM12O43184 909 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SMAD6O43541 496 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 BCHEP06276 602 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GNAO1P09471 354 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ITGAMP11215 1152 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ZNF26P17031 533 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 AMD1P17707 334 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 IDSP22304 550 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 NCBP2P52298 156 aaKnown RBP eCLIP5.58□□□□□ -1.522e-7■■■■□ 26.1
VPS50-220ENST00000544910 TAS2R50P59544 299 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 XKR7Q5GH72 579 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TNFAIP8L2Q6P589 184 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 PSRC1Q6PGN9 363 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 ZNF730Q6ZMV8 503 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CXXC5Q7LFL8 322 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 PTRH1Q86Y79 214 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 CLIP4Q8N3C7 705 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 METTL25Q8N6Q8 603 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 C10orf53Q8N6V4 93 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TTLQ8NG68 377 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GLYATL1Q969I3 302 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 COL26A1Q96A83 441 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ISG20Q96AZ6 181 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 RGMAQ96B86 450 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CCDC115Q96NT0 180 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CPEB1Q9BZB8 566 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 ACPTQ9BZG2 426 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 LHPPQ9H008 270 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TUBB1Q9H4B7 451 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ZNF334Q9HCZ1 680 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 MRPS30Q9NP92 439 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 DCAF13Q9NV06 445 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 GMPR2Q9P2T1 348 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 ATPIF1Q9UII2 106 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 HEBP2Q9Y5Z4 205 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 COLEC10Q9Y6Z7 277 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ZSWIM8A7E2V4 1837 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 NME6O75414 186 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 DNTTP04053 509 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 NR2F6P10588 404 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 MYL9P24844 172 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CTSOP43234 321 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 KCNC1P48547 511 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 VBP1P61758 197 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 APOFQ13790 326 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 UGT3A2Q3SY77 523 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GTDC1Q4AE62 458 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TAF8Q7Z7C8 310 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 MEIOBQ8N635 442 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FNDC8Q8TC99 324 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 XAGE5Q8WWM1 108 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 RERGQ96A58 199 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms