RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 COX20Q5RI15 118 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 KHDRBS2Q5VWX1 349 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ZFP1Q6P2D0 407 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 TSSK4Q6SA08 328 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ABHD11Q8NFV4 315 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 OR2L8Q8NGY9 312 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 TEFMQ96QE5 360 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ORAI3Q9BRQ5 295 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 LTB4R2Q9NPC1 389 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 NCOR1O75376 2440 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 A0A096LPI6 279 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 CLIC1O00299 241 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 NDUFS4O43181 175 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 CHRM5P08912 532 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 MAGP20916 626 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 MTAPQ13126 283 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 DUOXA1Q1HG43 343 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ZNF750Q32MQ0 723 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ZNF793Q6ZN11 406 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 OR4A15Q8NGL6 344 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 NELL1Q92832 810 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 FAM120BQ96EK7 910 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 MS4A8Q9BY19 250 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 SRMSQ9H3Y6 488 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 SLAMF7Q9NQ25 335 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 WASH6PQ9NQA3 447 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ADGRE2Q9UHX3 823 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 PCDHB11Q9Y5F2 797 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 C7orf72A4D263 438 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PRAMEF26H0Y7S4 382 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 CASQ2O14958 399 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 SDC3O75056 442 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 APBB3O95704 486 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 HSD3B1P14060 373 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ACPPP15309 386 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 TYRP1P17643 537 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 GGT1P19440 569 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PSMA4P25789 261 aaKnown RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PTX3P26022 381 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 HSD3B2P26439 372 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 BSGP35613 385 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 REEP5Q00765 189 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 FOXD4Q12950 439 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 BNIP2Q12982 314 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 LRIF1Q5T3J3 769 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 DEPDC1Q5TB30 811 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ANKRD34AQ69YU3 496 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 KCT2Q8NC54 265 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 OR8J3Q8NGG0 315 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 MAGEB10Q96LZ2 347 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 RMND5AQ9H871 391 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 CCM2LQ9NUG4 571 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 BCAP29Q9UHQ4 241 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PCDH15Q96QU1 1955 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 A6NCN8 305 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 B4DGG1 531 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 DNAJB6O75190 326 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 FURINP09958 794 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 F3P13726 295 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 HTR1EP28566 365 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 GZMMP51124 257 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 EPHX4Q8IUS5 362 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 OR8J2Q8NGG1 315 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 CREB3L4Q8TEY5 395 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ZUFSPQ96AP4 578 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 OTUB1Q96FW1 271 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 NSMCE2Q96MF7 247 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 SOX17Q9H6I2 414 aaPredicted RBP13.06□□□□□ -0.32
HCFC2-202ENST00000544223 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
HCFC2-202ENST00000544223 ELOVL7A1L3X0 281 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 CXCR6O00574 342 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 MAN2B1O00754 1011 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 PEX1O43933 1283 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 PRKD3O94806 890 aa13.05□□□□□ -0.32
HCFC2-202ENST00000544223 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
HCFC2-202ENST00000544223 NPPAP01160 153 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms