RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 POLR2JP52435 117 aaKnown RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 MTTPP55157 894 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 FOXA1P55317 472 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 OR1D5P58170 312 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 C21orf58P58505 322 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ACTR3P61158 418 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 AP2B1P63010 937 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 RHDQ02161 417 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 TAP2Q03519 686 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SRSF11Q05519 484 aaKnown RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 VAC14Q08AM6 782 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 TBL3Q12788 808 aaKnown RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CLN3Q13286 438 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 RCAN2Q14206 197 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CPSF6Q16630 551 aaKnown RBP eCLIP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 INO80CQ6PI98 192 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 DOK6Q6PKX4 331 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CRTC3Q6UUV7 619 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ZNF574Q6ZN55 896 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 C17orf64Q86WR6 236 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ULK2Q8IYT8 1036 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 DPP10Q8N608 796 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SLC37A2Q8TED4 501 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ZNF480Q8WV37 535 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SLC5A11Q8WWX8 675 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PATE1Q8WXA2 126 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 SPDL1Q96EA4 605 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 MOCOSQ96EN8 888 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 C3orf30Q96M34 536 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 DPY30Q9C005 99 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 VCX3BQ9H321 246 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 OR6C2Q9NZP2 312 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 CCDC167Q9P0B6 97 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 STOML1Q9UBI4 398 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 ATXN7L1Q9ULK2 861 aaPredicted RBP11.02□□□□□ -0.65
COPS7A-217ENST00000543537 RNF11Q9Y3C5 154 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PLEKHM1Q9Y4G2 1056 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 LOXL2Q9Y4K0 774 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 PCDHGA3Q9Y5H0 932 aa11.02□□□□□ -0.65
COPS7A-217ENST00000543537 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 IGHV5-10-1A0A0J9YXX1 117 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ATP6AP2A0A1C7CYW4 349 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ERVH48-1M5A8F1 160 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 MRASO14807 208 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 EEDO75530 441 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ATP6AP2O75787 350 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ATP6V1G2O95670 118 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 JUNP05412 331 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 JMJD7P0C870 316 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 NPPBP16860 134 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ITGAXP20702 1163 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 PDHA2P29803 388 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ALDH4A1P30038 563 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 PRDX3P30048 256 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 SHMT2P34897 504 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 GDF5P43026 501 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 CLDN8P56748 225 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 CFHR1Q03591 330 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 NFE2L1Q14494 772 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 KIR2DS5Q14953 304 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ABRAXAS2Q15018 415 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ZNF648Q5T619 568 aaPredicted RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 THEMIS2Q5TEJ8 643 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 C1orf146Q5VVC0 180 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 IL23RQ5VWK5 629 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 TMEM198Q66K66 360 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 PCSK4Q6UW60 755 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 NXPE4Q6UWF7 544 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 RPS27LQ71UM5 84 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 DTX1Q86Y01 620 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 LAS2Q8IYD9 372 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ABHD11Q8NFV4 315 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 ESAMQ96AP7 390 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 MED8Q96G25 268 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 NAF1Q96HR8 494 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 PPP1R36Q96LQ0 422 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 NUDT22Q9BRQ3 303 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 SEMA6CQ9H3T2 930 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 EPB41L1Q9H4G0 881 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 KIR3DX1Q9H7L2 352 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 SYNDIG1Q9H7V2 258 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 UCK1Q9HA47 277 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 TNFRSF12AQ9NP84 129 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 INTS7Q9NVH2 962 aaKnown RBP11.01□□□□□ -0.65
COPS7A-217ENST00000543537 TBC1D29Q9UFV1 150 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 BAIAP2L1Q9UHR4 511 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 BTRCQ9Y297 605 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 CCL27Q9Y4X3 112 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
COPS7A-217ENST00000543537 KCNE1BA0A087WTH5 132 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms