RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 FRMD6Q96NE9 622 aa16.36■□□□□ 0.21
PPP1CA-210ENST00000542876 NPAS2Q99743 824 aa16.36■□□□□ 0.21
PPP1CA-210ENST00000542876 SARGQ9BW04 601 aa16.36■□□□□ 0.21
PPP1CA-210ENST00000542876 ZNF835Q9Y2P0 537 aa16.36■□□□□ 0.21
PPP1CA-210ENST00000542876 NEU2Q9Y3R4 380 aa16.36■□□□□ 0.21
PPP1CA-210ENST00000542876 TRBC2A0A5B9 178 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 URADA6NGE7 173 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 CHST10O43529 356 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 ASNA1O43681 348 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 MAN1A2O60476 641 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 PRMT3O60678 531 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 SLC25A12O75746 678 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 WISP2O76076 250 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 ZNF24P17028 368 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 CYB561P49447 251 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 CDKN2DP55273 166 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 TIAL1Q01085 375 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 SPANXN3Q5MJ09 141 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 RBM20Q5T481 1227 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 Q6ZPB1 254 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 STRA8Q7Z7C7 330 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 EID3Q8N140 333 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 GHDCQ8N2G8 530 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 OR4K1Q8NGD4 311 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 OR56A3Q8NH54 315 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 ELP5Q8TE02 316 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 TMEM125Q96AQ2 219 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 MTFMTQ96DP5 389 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 LURAP1Q96LR2 239 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 PTCHD1Q96NR3 888 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 NAT9Q9BTE0 207 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 PPANQ9NQ55 473 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 ZFP69BQ9UJL9 534 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 MEMO1Q9Y316 297 aa16.35■□□□□ 0.21
PPP1CA-210ENST00000542876 PSMD12O00232 456 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 NEURL1O76050 574 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 CLDN14O95500 239 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 GUCA1CO95843 209 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 ZNF888P0CJ79 500 aaPredicted RBP16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 FNTAP49354 379 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 OLR1P78380 273 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 ARMC2Q8NEN0 867 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 ADAMTS18Q8TE60 1221 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 SLC5A11Q8WWX8 675 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 CLK4Q9HAZ1 481 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 ASIC3Q9UHC3 531 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 DYRK1BQ9Y463 629 aa16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 TEP1Q99973 2627 aaKnown RBP16.34■□□□□ 0.21
PPP1CA-210ENST00000542876 FCHO1O14526 889 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 PRRG2O14669 202 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 TSPAN12O95859 305 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 AHSGP02765 367 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 ENO2P09104 434 aaPredicted RBP16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 GABRB3P28472 473 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 AHRP35869 848 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 CATSPEREQ5SY80 951 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 QSOX2Q6ZRP7 698 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 CNTN4Q8IWV2 1026 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 KIF2BQ8N4N8 673 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 TRPV3Q8NET8 790 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 NT5CQ8TCD5 201 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 FBXL8Q96CD0 374 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 CERS2Q96G23 380 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 OLFM1Q99784 485 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 DEFB126Q9BYW3 111 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 SCN2AQ99250 2005 aa16.33■□□□□ 0.2
PPP1CA-210ENST00000542876 NME2P1O60361 137 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 RNH1P13489 461 aaKnown RBP16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 NME2P22392 152 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 TPP2P29144 1249 aaPredicted RBP16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 SSTR2P30874 369 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 HNF4AP41235 474 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 SCTRP47872 440 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 RAB8AP61006 207 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 HECTD2Q5U5R9 776 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 OTOGQ6ZRI0 2925 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 SIAH3Q8IW03 269 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 AGAP11Q8TF27 550 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 NEIL2Q969S2 332 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 TSNARE1Q96NA8 513 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 OR4K3Q96R72 315 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 AIF1LQ9BQI0 150 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 TRIM51Q9BSJ1 452 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 RHBGQ9H310 441 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 PRDM9Q9NQV7 894 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 PKDREJQ9NTG1 2253 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 CORO1CQ9ULV4 474 aaPredicted RBP16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 VWA7Q9Y334 891 aa16.32■□□□□ 0.2
PPP1CA-210ENST00000542876 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 DNALI1O14645 258 aaPredicted RBP16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 DNAJB6O75190 326 aa16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 B3GALT4O96024 378 aa16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 POU3F2P20265 443 aaPredicted RBP16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 HLCSP50747 726 aa16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 MLF1P58340 268 aa16.31■□□□□ 0.2
PPP1CA-210ENST00000542876 CCZ1BP86790 482 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms