RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 GPALPP1Q8IXQ4 340 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 PALM2Q8IXS6 379 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 CYP4X1Q8N118 509 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 MMP21Q8N119 569 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 CYP4Z2PQ8N1L4 340 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 MARVELD2Q8N4S9 558 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 AMER2Q8N7J2 671 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 KCT2Q8NC54 265 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 ZCCHC10Q8TBK6 192 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 ATG4AQ8WYN0 398 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 TSLPQ969D9 159 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 FAM136AQ96C01 138 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 LRRC46Q96FV0 321 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 SEC16BQ96JE7 1060 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 PTCHD1Q96NR3 888 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 HAUS8Q9BT25 410 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 POLDIP3Q9BY77 421 aaKnown RBP8.37□□□□□ -1.07
UBC-211ENST00000542416 UCK2Q9BZX2 261 aa8.37□□□□□ -1.07
UBC-211ENST00000542416 CCM2LQ9NUG4 571 aaPredicted RBP8.37□□□□□ -1.07
UBC-211ENST00000542416 TCRBV7S2A1N4TA0A589 114 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 MAGEB16A2A368 324 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 CTAGE9A4FU28 777 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 SYNDIG1LA6NDD5 238 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 TMEM200CA6NKL6 621 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 ZNHIT1O43257 154 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 CHST10O43529 356 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 GALR3O60755 368 aaPredicted RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 CTAG2O75638 210 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 STATHP02808 62 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 ACVR2AP27037 513 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 ZFP36L2P47974 494 aaKnown RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 ST13P50502 369 aaKnown RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 CCR8P51685 355 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 TBPL1P62380 186 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 CRADDP78560 199 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 BASP1P80723 227 aaKnown RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 RGS1Q08116 209 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 KIF5AQ12840 1032 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 TERF2Q15554 542 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 SLC25A35Q3KQZ1 300 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 BBS9Q3SYG4 887 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 GXYLT1Q4G148 440 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 UGT3A1Q6NUS8 523 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 B3GNT6Q6ZMB0 384 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 UBE2R2Q712K3 238 aaPredicted RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 STRA8Q7Z7C7 330 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 SLC22A16Q86VW1 577 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 CCDC71Q8IV32 467 aaPredicted RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 LMNTD2Q8IXW0 634 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 KIF2BQ8N4N8 673 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 AFAP1L2Q8N4X5 818 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 MFSD9Q8NBP5 474 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 OR10Q1Q8NGQ4 319 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 RMND5BQ96G75 393 aaPredicted RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 HES6Q96HZ4 224 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 MACROD1Q9BQ69 325 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 CCDC77Q9BR77 488 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 TRIM5Q9C035 493 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 PRDM9Q9NQV7 894 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 GALPQ9UBC7 116 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 ST6GALNAC2Q9UJ37 374 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 PACSIN2Q9UNF0 486 aaPredicted RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 YARS2Q9Y2Z4 477 aaKnown RBP8.36□□□□□ -1.07
UBC-211ENST00000542416 DHRS7Q9Y394 339 aa8.36□□□□□ -1.07
UBC-211ENST00000542416 TCRBV16S1A1N1A0A5B0 115 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 FEZF1A0PJY2 475 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 PABPN1LA6NDY0 278 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 ZNF860A6NHJ4 632 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 A8MVJ9 347 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 GOLGA8KD6RF30 607 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 GOLGA8TH3BQL2 631 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 NDUFS4O43181 175 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 B4GALT2O60909 372 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 PDE9AO76083 593 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 FTCDO95954 541 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 C8GP07360 202 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 MGAT1P26572 445 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 RPL22P35268 128 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 COILP38432 576 aaPredicted RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 RGS4P49798 205 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 SSR4P51571 173 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 NUP107P57740 925 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 PPIAP62937 165 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 PLGLB1Q02325 96 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 SP140Q13342 867 aa8.35□□□□□ -1.07
UBC-211ENST00000542416 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
UBC-211ENST00000542416 CCNG2Q16589 344 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms