RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PRUNE1Q86TP1 453 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 LRRC49Q8IUZ0 686 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 LGI4Q8N135 537 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 PYROXD1Q8WU10 500 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 KIAA1191Q96A73 305 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 LINC00615Q96LM1 132 aaPredicted RBP9.17□□□□□ -0.94
CHFR-220ENST00000541817 SMC6Q96SB8 1091 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 TTYH2Q9BSA4 534 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 CDCP1Q9H5V8 836 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 A0A0J9YVX5 310 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 FITM1A5D6W6 292 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 H7C0C1 242 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 NME2P1O60361 137 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 CTSVO60911 334 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 DNAJC8O75937 253 aaPredicted RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 SIX3O95343 332 aaPredicted RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 MX2P20592 715 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 NME2P22392 152 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 RPL22P35268 128 aaKnown RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 ATP5OP48047 213 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 SLC18A1P54219 525 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 GPR85P60893 370 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 MAT1AQ00266 395 aaKnown RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 ITGA9Q13797 1035 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 SPARCL1Q14515 664 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 DAZAP2Q15038 168 aaPredicted RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 PAFAH1B3Q15102 231 aaKnown RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 RASA2Q15283 850 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 TCTE1Q5JU00 501 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 YOD1Q5VVQ6 348 aaPredicted RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 RTL6Q6ICC9 239 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 ZNF227Q86WZ6 799 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 PALM2Q8IXS6 379 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 ZBED8Q8IZ13 594 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 PDIK1LQ8N165 341 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 BLOC1S5Q8TDH9 187 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 IMP4Q96G21 291 aaKnown RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 C10orf90Q96M02 699 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 IL17FQ96PD4 163 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 TSGA13Q96PP4 275 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 OLFM1Q99784 485 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 TRABDQ9H4I3 376 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 ASB8Q9H765 288 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 HAUS2Q9NVX0 235 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 PSMC3IPQ9P2W1 217 aaPredicted RBP9.16□□□□□ -0.94
CHFR-220ENST00000541817 CTNNAL1Q9UBT7 734 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 FETUBQ9UGM5 382 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 ASF1AQ9Y294 204 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 DNAJC13O75165 2243 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 ZNF407Q9C0G0 2248 aa9.16□□□□□ -0.94
CHFR-220ENST00000541817 SONP18583 2426 aaKnown RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 APOL1O14791 398 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 PRPF4O43172 522 aaKnown RBP eCLIP9.15□□□□□ -0.946e-6■■■■□ 20.1
CHFR-220ENST00000541817 DNAJB6O75190 326 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 CNOT4O95628 575 aaKnown RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 C8orf89P0DMQ9 161 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 RBP3P10745 1247 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 ACVR2AP27037 513 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 SCTRP47872 440 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 CD151P48509 253 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 PRLHRP49683 370 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 NR1H2P55055 460 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 AP2B1P63010 937 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 DPYSL3Q14195 570 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 KIR2DS3Q14952 304 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 ZNF658BQ4V348 819 aaPredicted RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 ZC3H12BQ5HYM0 836 aaKnown RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 MFSD4BQ5TF39 518 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 HHATQ5VTY9 493 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 PRMT9Q6P2P2 845 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 C4orf22Q6V702 233 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 TRPM8Q7Z2W7 1104 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 GLT6D1Q7Z4J2 308 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 SPATA21Q7Z572 469 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 TRABD2AQ86V40 505 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 SULF2Q8IWU5 870 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 CYP4X1Q8N118 509 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 GBP7Q8N8V2 638 aaPredicted RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 RELL2Q8NC24 303 aaPredicted RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 CCT6BQ92526 530 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 MMABQ96EY8 250 aaPredicted RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 DCUN1D1Q96GG9 259 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 ZNF285Q96NJ3 590 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 PAIP2Q9BPZ3 127 aaKnown RBP9.15□□□□□ -0.94
CHFR-220ENST00000541817 ALKBH4Q9NXW9 302 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 VPS9D1Q9Y2B5 631 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 ARL2BPQ9Y2Y0 163 aa9.15□□□□□ -0.94
CHFR-220ENST00000541817 ARID1AO14497 2285 aa9.14□□□□□ -0.95
CHFR-220ENST00000541817 MBD3L4A6NDZ8 208 aaPredicted RBP9.14□□□□□ -0.95
CHFR-220ENST00000541817 CFAP73A6NFT4 308 aa9.14□□□□□ -0.95
CHFR-220ENST00000541817 MBD3L5A6NJ08 208 aaPredicted RBP9.14□□□□□ -0.95
CHFR-220ENST00000541817 CLCA1A8K7I4 914 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms