RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 S100BP04271 92 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 UMODP07911 640 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 NCF1P14598 390 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 H2AFXP16104 143 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 NPPBP16860 134 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 MAGP20916 626 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ALAS2P22557 587 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 PTGER4P35408 488 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 GABRA4P48169 554 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 CCT5P48643 541 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 SLC18A2Q05940 514 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ART3Q13508 389 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 TSTA3Q13630 321 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 TLR1Q15399 786 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ZIC1Q15915 447 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 THEMIS2Q5TEJ8 643 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 FCRL6Q6DN72 434 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ZNF425Q6IV72 752 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 RHBDD2Q6NTF9 364 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 METTL2BQ6P1Q9 378 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 GFRALQ6UXV0 394 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 C17orf64Q86WR6 236 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 TMEM151AQ8N4L1 468 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 DNAJC22Q8N4W6 341 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 BCORP1Q8N888 145 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 CATSPER1Q8NEC5 780 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ABHD11Q8NFV4 315 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 PROKR1Q8TCW9 393 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ITLN2Q8WWU7 325 aaPredicted RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 PYCR2Q96C36 320 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 THOC3Q96J01 351 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 OR4K3Q96R72 315 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 TMEM79Q9BSE2 394 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 DPH7Q9BTV6 452 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ACAT2Q9BWD1 397 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 CAPS2Q9BXY5 557 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 MRPL46Q9H2W6 279 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 FAM60AQ9NP50 221 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 TMEM184CQ9NVA4 438 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 MKS1Q9NXB0 559 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 WWOXQ9NZC7 414 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 SENP1Q9P0U3 644 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 XPR1Q9UBH6 696 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 AP1M2Q9Y6Q5 423 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 ABCA12Q86UK0 2595 aa8.27□□□□□ -1.09
CLSTN3-212ENST00000541770 FBN2P35556 2912 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 C2CD3Q4AC94 2353 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 MYO7BQ6PIF6 2116 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 IGKV1-8A0A0C4DH67 115 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CCL21O00585 134 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 RGS16O15492 202 aaPredicted RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 ZSCAN9O15535 394 aaPredicted RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 HCRTR1O43613 425 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 STK16O75716 305 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CTSBP07858 339 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SBK3P0C264 359 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 EZRP15311 586 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 KRT4P19013 534 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CRHR1P34998 444 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 ALDH18A1P54886 795 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SOX8P57073 446 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 YBX1P67809 324 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 ARG2P78540 354 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SRSF11Q05519 484 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 PCDH1Q08174 1060 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CASP8Q14790 479 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SETDB1Q15047 1291 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 KRT71Q3SY84 523 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 NKAIN1Q4KMZ8 207 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 TNFAIP8L3Q5GJ75 292 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 ZC3H12BQ5HYM0 836 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CEP85LQ5SZL2 805 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 B3GNTL1Q67FW5 361 aaPredicted RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SHISA6Q6ZSJ9 500 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 RNF44Q7L0R7 432 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 LRRC70Q7Z2Q7 622 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 THOC6Q86W42 341 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 PAQR7Q86WK9 346 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 OR4K1Q8NGD4 311 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 OR1N1Q8NGS0 311 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 ALKBH8Q96BT7 664 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 PGM2Q96G03 612 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CCDC120Q96HB5 630 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 PKNOX2Q96KN3 472 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 NDC1Q9BTX1 674 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SARGQ9BW04 601 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CD244Q9BZW8 370 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 LHPPQ9H008 270 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SOX17Q9H6I2 414 aaPredicted RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 TMEM216Q9P0N5 145 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 GRID1Q9ULK0 1009 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 SLC22A14Q9Y267 594 aa8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 TNPO3Q9Y5L0 923 aaKnown RBP8.26□□□□□ -1.09
CLSTN3-212ENST00000541770 KLF2Q9Y5W3 355 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms