RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CADM3Q8N126 398 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 LRRC75A-AS1Q8N1F1 130 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZCCHC9Q8N567 271 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZNF611Q8N823 705 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SMYD1Q8NB12 490 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 OR1E3Q8WZA6 343 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 LARP4BQ92615 738 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 FAM46BQ96A09 425 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SPDL1Q96EA4 605 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NPY6RQ99463 290 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 COQ7Q99807 217 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZNF559Q9BR84 538 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 C11orf70Q9BRQ4 267 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TRMOQ9BU70 441 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NTMT1Q9BV86 223 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NUP58Q9BVL2 599 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 OSBPL1AQ9BXW6 950 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 LRRC2Q9BYS8 371 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 TOR3AQ9H497 397 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 SLC28A3Q9HAS3 691 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 APMAPQ9HDC9 416 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 RNF186Q9NXI6 227 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 NOP53Q9NZM5 478 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 EMC3Q9P0I2 261 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 WNT16Q9UBV4 365 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ANGPTL2Q9UKU9 493 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ADAMTS5Q9UNA0 930 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 MRPS33Q9Y291 106 aaKnown RBP5.27□□□□□ -1.57
DDB1-219ENST00000541513 NME7Q9Y5B8 376 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 MCM3APO60318 1980 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZNF236Q9UL36 1845 aa5.27□□□□□ -1.57
DDB1-219ENST00000541513 ZSWIM8A7E2V4 1837 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TMEM221A6NGB7 291 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ANKRD61A6NGH8 418 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PRR19A6NJB7 356 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TCP11X1B4DZS4 312 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PRAMEF2O60811 474 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 CAVIN2O95810 425 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 C1RP00736 705 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 KRT6AP02538 564 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ICAM1P05362 532 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PABPC4LP0CB38 370 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 ODC1P11926 461 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 FOSL2P15408 326 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 GCFC2P16383 781 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 PRKACAP17612 351 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TGM2P21980 687 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 NDUFS1P28331 727 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 FCGR2BP31994 310 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 RPL9P32969 192 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 CYP2C18P33260 490 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SYKP43405 635 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 CHRNA4P43681 627 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 FMO5P49326 533 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 CRYBB1P53674 252 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 CDK3Q00526 305 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TGM3Q08188 693 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 CRHR2Q13324 411 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PCK2Q16822 640 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 GPAT3Q53EU6 434 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PDLIM3Q53GG5 364 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 ZMAT1Q5H9K5 638 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 METRNLQ641Q3 311 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SEL1L3Q68CR1 1132 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 C18orf63Q68DL7 685 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LRRC8EQ6NSJ5 796 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LRRC8BQ6P9F7 803 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TRMT10BQ6PF06 316 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 DEGS2Q6QHC5 323 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ZNF474Q6S9Z5 364 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 PRSS55Q6UWB4 352 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 FAM159AQ6UWV7 190 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TMEM26Q6ZUK4 368 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 CD163Q86VB7 1156 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LAX1Q8IWV1 398 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LSMEM2Q8N112 164 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ARHGAP24Q8N264 748 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 TCAIMQ8N3R3 496 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 GALNT16Q8N428 558 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 BOLLQ8N9W6 283 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 KYQ8NBH2 561 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 OR4N2Q8NGD1 307 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 WDR20Q8TBZ3 569 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PAQR8Q8TEZ7 354 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PIBF1Q8WXW3 757 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PIGKQ92643 395 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 AKAP1Q92667 903 aaKnown RBP eCLIP5.26□□□□□ -1.57
DDB1-219ENST00000541513 GLG1Q92896 1179 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SGK3Q96BR1 496 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 MOB3AQ96BX8 217 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ULK4Q96C45 1275 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ZNF274Q96GC6 653 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 MAGED4Q96JG8 741 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SNX18Q96RF0 628 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 ACOX2Q99424 681 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SYT3Q9BQG1 590 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 MXRA8Q9BRK3 442 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms