RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MAU2Q9Y6X3 613 aa14.73□□□□□ -0.05
DDB1-218ENST00000540784 WDFY3Q8IZQ1 3526 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 A0A087WV48 116 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 A0A1B0GTL3 188 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 TMEM120BA0PK00 339 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 H0YIG0 161 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 H3BQF6 201 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 FFAR3O14843 346 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 BIRC5O15392 142 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 GPR42O15529 346 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 SASH3O75995 380 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 TGFB1P01137 390 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 RAB40ALP0C0E4 278 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 ZNF888P0CJ79 500 aaPredicted RBP14.72□□□□□ -0.05
DDB1-218ENST00000540784 SMIM10L1P0DMW3 83 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 NEFHP12036 1026 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 LIFP15018 202 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 ALOX12P18054 663 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 PTX3P26022 381 aaPredicted RBP14.72□□□□□ -0.05
DDB1-218ENST00000540784 NEK2P51955 445 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 RAB8AP61006 207 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 TGM3Q08188 693 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 HYAL2Q12891 473 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 IFT88Q13099 833 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 DNASE1L3Q13609 305 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 GGTA1PQ4G0N0 100 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 TMEM35AQ53FP2 167 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 SGO1Q5FBB7 561 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 ADNP2Q6IQ32 1131 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 NIPAL1Q6NVV3 410 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 LETMD1Q6P1Q0 360 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 FRMD7Q6ZUT3 714 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 AFAP1L2Q8N4X5 818 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 DTWD1Q8N5C7 304 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 OR9A4Q8NGU2 314 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 PPP1R14CQ8TAE6 165 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 METTL6Q8TCB7 284 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 UTP15Q8TED0 518 aaKnown RBP14.72□□□□□ -0.05
DDB1-218ENST00000540784 SMIM10Q96HG1 83 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 FAR2Q96K12 515 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 F2RL3Q96RI0 385 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 MTERF1Q99551 399 aaKnown RBP14.72□□□□□ -0.05
DDB1-218ENST00000540784 TRMOQ9BU70 441 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 FAM117AQ9C073 453 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 REXO4Q9GZR2 422 aaKnown RBP14.72□□□□□ -0.05
DDB1-218ENST00000540784 ELOVL6Q9H5J4 265 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 SLC22A11Q9NSA0 550 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 ZNF446Q9NWS9 450 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 PSD3Q9NYI0 1048 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 NKIRAS1Q9NYS0 192 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 SNX6Q9UNH7 406 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 NAALAD2Q9Y3Q0 740 aa14.72□□□□□ -0.05
DDB1-218ENST00000540784 SPTBP11277 2137 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SGK494L7N484 410 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 FOXE1O00358 373 aaPredicted RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 UBFD1O14562 309 aaKnown RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 NPHS1O60500 1241 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 CRCPO75575 148 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 NSA2O95478 260 aaKnown RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 ESRRBO95718 433 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 ALBP02768 609 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 CAPN1P07384 714 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 IL1RNP18510 177 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 ITGAXP20702 1163 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 FBLP22087 321 aaKnown RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 F8A1P23610 371 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 ITPKBP27987 946 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 PTPN4P29074 926 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SKP1P63208 163 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 BTN3A2P78410 334 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SLC9A5Q14940 896 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 DEFB134Q4QY38 66 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 C10orf62Q5T681 223 aaPredicted RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 DEPDC1Q5TB30 811 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 FRG2Q64ET8 278 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 CDYL2Q8N8U2 506 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SRFBP1Q8NEF9 429 aaKnown RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 WDR20Q8TBZ3 569 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 MS4A6EQ96DS6 147 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 FRG2BQ96QU4 278 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 EML4Q9HC35 981 aaKnown RBP14.71□□□□□ -0.05
DDB1-218ENST00000540784 ZNF225Q9UK10 706 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SDK2Q58EX2 2172 aa14.71□□□□□ -0.05
DDB1-218ENST00000540784 SRRM3A6NNA2 597 aaPredicted RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 MAGEB17A8MXT2 336 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 HMGB1P1B2RPK0 211 aaPredicted RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 TERTO14746 1132 aaKnown RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 EFSO43281 561 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 ERI3O43414 337 aaKnown RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 GALR3O60755 368 aaPredicted RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 SH3BGRLO75368 114 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 KLHL18O94889 574 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 TBX6O95947 436 aaPredicted RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 KRT6AP02538 564 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 KRT6BP04259 564 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 ENO1P06733 434 aaKnown RBP14.7□□□□□ -0.06
DDB1-218ENST00000540784 DHRS4L1P0CG22 281 aa14.7□□□□□ -0.06
DDB1-218ENST00000540784 HMOX2P30519 316 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms