RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZFP69BQ9UJL9 534 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 AP1M2Q9Y6Q5 423 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 SPTBN1Q01082 2364 aaKnown RBP15.89■□□□□ 0.13
UBC-208ENST00000540700 H0YIV9 168 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 FFAR3O14843 346 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 GPR42O15529 346 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 ZSCAN9O15535 394 aaPredicted RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 ZNF749O43361 778 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 SRPX2O60687 465 aaPredicted RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 H2AFYO75367 372 aaKnown RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 MLYCDO95822 493 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 B3GALT4O96024 378 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 CAPN1P07384 714 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 NR1D1P20393 614 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 ITGAXP20702 1163 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 GRK3P35626 688 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 AHRP35869 848 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 NEK2P51955 445 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 RAB15P59190 212 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 RCN2Q14257 317 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 ARL13AQ5H913 290 aaPredicted RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 CFAP157Q5JU67 520 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 DCAF12Q5T6F0 453 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 MED27Q6P2C8 311 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 GPRIN3Q6ZVF9 776 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 TIPARPQ7Z3E1 657 aaKnown RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 CUZD1Q86UP6 607 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 KRT78Q8N1N4 520 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 CDYL2Q8N8U2 506 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 KCT2Q8NC54 265 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 ZNF473Q8WTR7 871 aaKnown RBP15.88■□□□□ 0.13
UBC-208ENST00000540700 THAP11Q96EK4 314 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 CNDP1Q96KN2 507 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 SORT1Q99523 831 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 DRC3Q9H069 523 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 KLHL31Q9H511 634 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 FANCEQ9HB96 536 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 MID1IP1Q9NPA3 183 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 TIMM22Q9Y584 194 aa15.88■□□□□ 0.13
UBC-208ENST00000540700 TMEM233B4DJY2 109 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 NDUFS4O43181 175 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 MAP3K7O43318 606 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 SCRG1O75711 98 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 KIAA0754O94854 1291 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 ETHE1O95571 254 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 ESRRBO95718 433 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 DLGAP3O95886 979 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 SERPINE1P05121 402 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 PCNAP12004 261 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 HNRNPH1P31943 449 aaKnown RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 ARL1P40616 181 aaPredicted RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 HNF4AP41235 474 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 LAPTM5Q13571 262 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 PAGE2BQ5JRK9 111 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 ZNF385CQ66K41 422 aaPredicted RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 LCN10Q6JVE6 187 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 TMEM214Q6NUQ4 689 aaKnown RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 PRSS41Q7RTY9 318 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 HUS1BQ8NHY5 278 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 NT5CQ8TCD5 201 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 SLC13A3Q8WWT9 602 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 N4BP2L2Q92802 583 aaPredicted RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 MTFMTQ96DP5 389 aaKnown RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 SLC6A16Q9GZN6 736 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 DHCR7Q9UBM7 475 aaKnown RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 SERTAD3Q9UJW9 196 aa15.87■□□□□ 0.13
UBC-208ENST00000540700 TMEM184BQ9Y519 407 aaPredicted RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 MDC1Q14676 2089 aaKnown RBP15.87■□□□□ 0.13
UBC-208ENST00000540700 SH3BGRLO75368 114 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 STK17BO94768 372 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 SERPIND1P05546 499 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 CXCR2P25025 360 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 SERPINB3P29508 390 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 RORAP35398 523 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 PKNOX1P55347 436 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 FOXK1P85037 733 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 BST1Q10588 318 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 GPS2Q13227 327 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 C4orf17Q53FE4 359 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 TCTE1Q5JU00 501 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 CLEC6AQ6EIG7 209 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 TLDC1Q6P9B6 456 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 BORAQ6PGQ7 559 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 DTX1Q86Y01 620 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 TMEM126BQ8IUX1 230 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 METTL27Q8N6F8 245 aaPredicted RBP15.86■□□□□ 0.13
UBC-208ENST00000540700 OR8K5Q8NH50 307 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 ZCCHC10Q8TBK6 192 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 RERGQ96A58 199 aaPredicted RBP15.86■□□□□ 0.13
UBC-208ENST00000540700 HBEGFQ99075 208 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 MTERF1Q99551 399 aaKnown RBP15.86■□□□□ 0.13
UBC-208ENST00000540700 MS4A8Q9BY19 250 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 PITHD1Q9GZP4 211 aaPredicted RBP15.86■□□□□ 0.13
UBC-208ENST00000540700 DMRT3Q9NQL9 472 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 IRAK4Q9NWZ3 460 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 ZDHHC2Q9UIJ5 367 aa15.86■□□□□ 0.13
UBC-208ENST00000540700 MAN2B2Q9Y2E5 1009 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms