RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 NSL1Q96IY1 281 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 MARK4Q96L34 752 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ZNF578Q96N58 590 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 TAAR9Q96RI9 348 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 MIPEPQ99797 713 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PCBD2Q9H0N5 130 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 EHD1Q9H4M9 534 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PFDN4Q9NQP4 134 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 FARSBQ9NSD9 589 aaKnown RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 RIC8BQ9NVN3 520 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 TAGLN3Q9UI15 199 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 KCNE2Q9Y6J6 123 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 IGKV1-8A0A0C4DH67 115 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 OR2A25A4D2G3 310 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 C9orf172C9J069 976 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 ANKRD65E5RJM6 399 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SLC28A1O00337 649 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FFAR3O14843 346 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 GPR42O15529 346 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 BRINP1O60477 761 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 HNRNPCL1O60812 293 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 ULK1O75385 1050 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 DNAJC8O75937 253 aaPredicted RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 TNFSF15O95150 251 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 CCNDBP1O95273 360 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 PDYNP01213 254 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 KRT6AP02538 564 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 KRT6BP04259 564 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FGF5P12034 268 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FOLR1P15328 257 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 CD1EP15812 388 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 GNAZP19086 355 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 CALB2P22676 271 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 PRPH2P23942 346 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 GRIA3P42263 894 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 KRT6CP48668 564 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 YBX1P67809 324 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 ACY1Q03154 408 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 RELAQ04206 551 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 PRDX1Q06830 199 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 ACTN3Q08043 901 aaPredicted RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 IL11RAQ14626 422 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 HERC3Q15034 1050 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SF1Q15637 639 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 ZRSR2Q15696 482 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 SMU1Q2TAY7 513 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 TBC1D25Q3MII6 688 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 XKR6Q5GH73 641 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 C6orf136Q5SQH8 315 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FRG2Q64ET8 278 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ICE2Q659A1 982 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ATG9BQ674R7 924 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FCRL6Q6DN72 434 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ZNF425Q6IV72 752 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 CYB5D1Q6P9G0 228 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FIGLAQ6QHK4 219 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SPATA19Q7Z5L4 167 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 TMPRSS11BQ86T26 416 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FAM20CQ8IXL6 584 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 DNAJC22Q8N4W6 341 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 OR8K5Q8NH50 307 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ZNF501Q96CX3 271 aaPredicted RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 FCRL4Q96PJ5 515 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 TEFMQ96QE5 360 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 FRG2BQ96QU4 278 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 HBEGFQ99075 208 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ZPBPQ9BS86 351 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 HAUS8Q9BT25 410 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ASPSCR1Q9BZE9 553 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ACPTQ9BZG2 426 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SPRY4Q9C004 299 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 LRMDAQ9H2I8 198 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 FAM60AQ9NP50 221 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 PDE7BQ9NP56 450 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SLC6A20Q9NP91 592 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 MRGBPQ9NV56 204 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 AIG1Q9NVV5 245 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 SLC39A1Q9NY26 324 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ANKMY1Q9P2S6 941 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 PISDQ9UG56 409 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 ZNF490Q9ULM2 529 aaPredicted RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 G3BP2Q9UN86 482 aaKnown RBP10.12□□□□□ -0.79
ATL3-204ENST00000540699 SNX6Q9UNH7 406 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 DYRK1BQ9Y463 629 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 AK5Q9Y6K8 562 aa10.12□□□□□ -0.79
ATL3-204ENST00000540699 H3BMH7 237 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 RGS14O43566 566 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 PRAMEF10O60809 474 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 C1GALT1C1LP0DN25 315 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 MAGP20916 626 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 GPX3P22352 226 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 HRH2P25021 359 aa10.11□□□□□ -0.79
ATL3-204ENST00000540699 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
ATL3-204ENST00000540699 CD82P27701 267 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms