RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ITPAQ9BY32 194 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 MTG2Q9H4K7 406 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 METTL15A6NJ78 407 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 OR2AG2A6NM03 316 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 WWP2O00308 870 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 WNT9AO14904 365 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 DYRK3O43781 588 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ADRA2AP08913 450 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CTSAP10619 480 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 RRM2P31350 389 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 PTPN5P54829 565 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 OR2B6P58173 313 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ARMCX4Q5H9R4 360 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SHQ1Q6PI26 577 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 MMAAQ8IVH4 418 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SIX5Q8N196 739 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SETD9Q8NE22 299 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ZNF296Q8WUU4 475 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SORCS1Q8WY21 1168 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 GTPBP3Q969Y2 492 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 RDH12Q96NR8 316 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 MAGIXQ9H6Y5 334 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 KLHL42Q9P2K6 505 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 NAALAD2Q9Y3Q0 740 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 KCNK5O95279 499 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 GBAP04062 536 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 FABP3P05413 133 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 C8GP07360 202 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 PRPS2P11908 318 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ITGB8P26012 769 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ACVR2AP27037 513 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ETV3P41162 512 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CTSKP43235 329 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CRYBA2P53672 197 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 MTAPQ13126 283 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CAMK2GQ13555 558 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CDKL4Q5MAI5 379 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 Q6ZVL8 140 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ANKRD33Q7Z3H0 272 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 PTOV1Q86YD1 416 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 TCEAL4Q96EI5 215 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CFHR5Q9BXR6 569 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CPEB1Q9BZB8 566 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 FADS2P1A8MWK0 482 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 E7EQ34 232 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 LOC110117498-PIK3R3F6TDL0 507 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 J3KTA2 159 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CCRL2O00421 344 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 LRRTM2O43300 516 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CKMT1AP12532 417 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 KIAA1614Q5VZ46 1190 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 KDM4DQ6B0I6 523 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC44A2Q8IWA5 706 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 STX19Q8N4C7 294 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CEP19Q96LK0 163 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 FEVQ99581 238 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 CNPPD1Q9BV87 410 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 LINC00597Q9H2U6 94 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 REEP1Q9H902 201 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 PAQR5Q9NXK6 330 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
SFSWAP-208ENST00000539506 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 NEDD8-MDP1E9PL57 170 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 FAM227AF5H4B4 570 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 CLIC1O00299 241 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 SEMG1P04279 462 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 HIST1H2AGP0C0S8 130 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 HIST1H2ADP20671 130 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 SSTR4P31391 388 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 ADIPOR2Q86V24 386 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 ZZZ3Q8IYH5 903 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 WDR20Q8TBZ3 569 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 FBLIM1Q8WUP2 373 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 GGHQ92820 318 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 C11orf24Q96F05 449 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 HIST1H2AHQ96KK5 128 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 FCRL1Q96LA6 429 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 HIST1H2AJQ99878 128 aa12.08□□□□□ -0.48
SFSWAP-208ENST00000539506 H2AFJQ9BTM1 129 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms