RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PPCDCQ96CD2 204 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 EPYCQ99645 322 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 DOHHQ9BU89 302 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 REEP1Q9H902 201 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 TMEM98Q9Y2Y6 226 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 TNFRSF21O75509 655 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 HTR1AP08908 422 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 HSD17B2P37059 387 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 OPRD1P41143 372 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 DCTN2Q13561 401 aaKnown RBP17.19■□□□□ 0.34
GNE-204ENST00000539208 PIP5KL1Q5T9C9 394 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 TMIGD1Q6UXZ0 262 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 OXR1Q8N573 874 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 LMNTD1Q8N9Z9 388 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 GPATCH2Q9NW75 528 aa17.19■□□□□ 0.34
GNE-204ENST00000539208 PDP1Q9P0J1 537 aaPredicted RBP17.19■□□□□ 0.34
GNE-204ENST00000539208 SAMHD1Q9Y3Z3 626 aaKnown RBP17.19■□□□□ 0.34
GNE-204ENST00000539208 PCYT1BQ9Y5K3 369 aaPredicted RBP17.19■□□□□ 0.34
GNE-204ENST00000539208 KIF26AQ9ULI4 1882 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 TMEM229AB2RXF0 380 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 GCM2O75603 506 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 NTRK1P04629 796 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 AGXTP21549 392 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 FCARP24071 287 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 SELENOWP63302 87 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 FADDQ13158 208 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 CAMK2GQ13555 558 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 RAPSNQ13702 412 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 FAHD1Q6P587 224 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 OR4K1Q8NGD4 311 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 TFGQ92734 400 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 TMEM38AQ9H6F2 299 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 NUP214P35658 2090 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 NOL3O60936 208 aaKnown RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 C9P02748 559 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 RPN2P04844 631 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 EPHX1P07099 455 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 MATN1P21941 496 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 TAS2R50P59544 299 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 CXCR4P61073 352 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 HPCAP84074 193 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 MEF2AQ02078 507 aaPredicted RBP17.18■□□□□ 0.34
GNE-204ENST00000539208 CYP2A13Q16696 494 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 DUSP6Q16828 381 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 VN1R5Q7Z5H4 357 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 GALNT5Q7Z7M9 940 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 HEATR4Q86WZ0 1026 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 ZNF740Q8NDX6 193 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 MAL2Q969L2 176 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 TPD52L3Q96J77 140 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 SLC35A5Q9BS91 424 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 LHPPQ9H008 270 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 RHBGQ9H310 441 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 PELI2Q9HAT8 420 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 HCN2Q9UL51 889 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 PCDHGB3Q9Y5G1 929 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 PCDHGB1Q9Y5G3 927 aa17.18■□□□□ 0.34
GNE-204ENST00000539208 COL4A3Q01955 1670 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 ALPK3Q96L96 1907 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 DIRAS1O95057 198 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 C6orf47O95873 294 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 GBAP04062 536 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 KLK1P06870 262 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 JUNDP17535 347 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 CRATP43155 626 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 CLK3P49761 638 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 MC1RQ01726 317 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 MPEG1Q2M385 716 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 METRNLQ641Q3 311 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 CCDC80Q76M96 950 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 OR5K2Q8NHB8 316 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 SGCDQ92629 289 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 IL17FQ96PD4 163 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 NODALQ96S42 347 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 NAA50Q9GZZ1 169 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 RAD21L1Q9H4I0 556 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 THUMPD1Q9NXG2 353 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 TAS2R9Q9NYW1 312 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 AHSPQ9NZD4 102 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 SLC23A2Q9UGH3 650 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 NDRG4Q9ULP0 352 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 WBP11Q9Y2W2 641 aaKnown RBP17.17■□□□□ 0.34
GNE-204ENST00000539208 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
GNE-204ENST00000539208 KLHL33A6NCF5 533 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 E9PQ18 207 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 CA3P07451 260 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 ITIH1P19827 911 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 ERVK-21P61565 698 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 CDK3Q00526 305 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 IL5RAQ01344 420 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 AGERQ15109 404 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 GCNT6Q5T4J0 391 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 ZNF852Q6ZMS4 543 aa17.16■□□□□ 0.34
GNE-204ENST00000539208 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
GNE-204ENST00000539208 RAB2BQ8WUD1 216 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms