RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	IL1RN	P18510	177 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NR1D1	P20393	614 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	JAK1	P23458	1154 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TYK2	P29597	1187 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	XCR1	P46094	333 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KCNC1	P48547	511 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PIK3CG	P48736	1102 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ARFIP1	P53367	373 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FOXK1	P85037	733 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HYAL2	Q12891	473 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	DLG1	Q12959	904 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NAA30	Q147X3	362 aa	Predicted RBP	11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TSNAXIP1	Q2TAA8	658 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LGSN	Q5TDP6	509 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MROH9	Q5TGP6	573 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PDSS2	Q86YH6	399 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KBTBD2	Q8IY47	623 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ZADH2	Q8N4Q0	377 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SRFBP1	Q8NEF9	429 aa	Known RBP	11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ADAMTS18	Q8TE60	1221 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	UTP15	Q8TED0	518 aa	Known RBP	11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	GAL3ST3	Q96A11	431 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NXNL1	Q96CM4	212 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IMMP1L	Q96LU5	166 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TSNARE1	Q96NA8	513 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	VN1R1	Q9GZP7	353 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SPNS1	Q9H2V7	528 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ALG9	Q9H6U8	611 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NAALAD2	Q9Y3Q0	740 aa		11.63	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TENM4	Q6N022	2769 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ANKDD1B	A6NHY2	528 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MAGEB17	A8MXT2	336 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828		K7EPI3	171 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ACSL3	O95573	720 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ITGA3	P26006	1051 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	GDF5	P43026	501 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HSPA7	P48741	367 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ALDH18A1	P54886	795 aa	Known RBP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	KCNC4	Q03721	635 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SLBP	Q14493	270 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SETDB1	Q15047	1291 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RBBP5	Q15291	538 aa	Known RBP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CRB2	Q5IJ48	1285 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HIST2H2AA3	Q6FI13	130 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ISLR2	Q6UXK2	745 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TIFAB	Q6ZNK6	161 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	QSOX2	Q6ZRP7	698 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828		Q6ZS92	163 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRSS41	Q7RTY9	318 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SPATA6L	Q8N4H0	392 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MIB2	Q96AX9	1013 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TBC1D20	Q96BZ9	403 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MTBP	Q96DY7	904 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	GPR78	Q96P69	363 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PAFAH2	Q99487	392 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	YIPF2	Q9BWQ6	316 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	ROGDI	Q9GZN7	287 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RNF32	Q9H0A6	362 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CLMP	Q9H6B4	373 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EPS8L2	Q9H6S3	715 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LANCL2	Q9NS86	450 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PSD3	Q9NYI0	1048 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	OPTC	Q9UBM4	332 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	B3GNT3	Q9Y2A9	372 aa		11.62	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FLNC	Q14315	2725 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LRIT2	A6NDA9	550 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NCF1B	A6NI72	391 aa	Predicted RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828		A6NL46	340 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NCF1C	A8MVU1	366 aa	Predicted RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SGK494	L7N484	410 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FH	P07954	510 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SNRPA	P09012	282 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRR35	P0CG20	571 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RNH1	P13489	461 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	NCF1	P14598	390 aa	Predicted RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EPB42	P16452	691 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EPOR	P19235	508 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SOX11	P35716	441 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	HNF4A	P41235	474 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MSH2	P43246	934 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TSFM	P43897	325 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	FOXL2	P58012	376 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MAT1A	Q00266	395 aa	Known RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RHAG	Q02094	409 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	IRF8	Q02556	426 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TGM3	Q08188	693 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828		Q0VFX4	171 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MFAP5	Q13361	173 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RCN2	Q14257	317 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PCOLCE	Q15113	449 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	EXT1	Q16394	746 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	SYT16	Q17RD7	645 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	DEFB134	Q4QY38	66 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	C10orf62	Q5T681	223 aa	Predicted RBP	11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LIPJ	Q5W064	366 aa		11.61	□□□□□ -0.55
CLTCL1-205	ENST00000538828	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.61	□□□□□ -0.55

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