RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ANKUB1A6NFN9 424 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 GALR3O60755 368 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 DNAJB6O75190 326 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 FAM155BO75949 473 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 GP1BBP13224 206 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 CD1DP15813 335 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 ALOX12P18054 663 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 GMPRP36959 345 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 GDF5P43026 501 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 RGS1Q08116 209 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 USP10Q14694 798 aaKnown RBP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 EFTUD2Q15029 972 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 HERC3Q15034 1050 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 RBBP5Q15291 538 aaKnown RBP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 TGFBIQ15582 683 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 BTBD16Q32M84 506 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 FBXO48Q5FWF7 155 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 GRTP1Q5TC63 336 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 HIST2H2BCQ6DN03 193 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 RIPOR1Q6ZS17 1223 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 AFAP1L2Q8N4X5 818 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 OR1N1Q8NGS0 311 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 NT5CQ8TCD5 201 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 SSC4DQ8WTU2 575 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 TSPAN17Q96FV3 270 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 AIF1LQ9BQI0 150 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 AGPAT4Q9NRZ5 378 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 LANCL2Q9NS86 450 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 TXNDC16Q9P2K2 825 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 C19orf25Q9UFG5 118 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 DMGDHQ9UI17 866 aaKnown RBP14.11□□□□□ -0.15
RAB40B-202ENST00000538809 ZFP69BQ9UJL9 534 aa14.11□□□□□ -0.15
RAB40B-202ENST00000538809 C4orf51C9J302 202 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 E2F3O00716 465 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 WDPCPO95876 746 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 STMN1P16949 149 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 STX2P32856 288 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 AHRP35869 848 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 HNMTP50135 292 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 RAB8AP61006 207 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 RHAGQ02094 409 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 ZNF33BQ06732 778 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 NAB1Q13506 487 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 PWP1Q13610 501 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 ELOAQ14241 798 aaKnown RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 ABRAXAS2Q15018 415 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 TOR1AIP1Q5JTV8 583 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 UBAP2Q5T6F2 1119 aaKnown RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 FCRLBQ6BAA4 426 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 CTAGE3PQ8IX95 158 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 PPM1NQ8N819 430 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 NOA1Q8NC60 698 aaKnown RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 UTP15Q8TED0 518 aaKnown RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 EXT2Q93063 718 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 BARD1Q99728 777 aaKnown RBP14.1□□□□□ -0.15
RAB40B-202ENST00000538809 TMEM79Q9BSE2 394 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 KLHL31Q9H511 634 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 KCNE2Q9Y6J6 123 aa14.1□□□□□ -0.15
RAB40B-202ENST00000538809 A1L4Q6 167 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 TAPBPO15533 448 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 CHST10O43529 356 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 FHP07954 510 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 CYC1P08574 325 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 SLC35E2BP0CK96 405 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 GGT5P36269 586 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 AGTR2P50052 363 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 ST13P50502 369 aaKnown RBP14.09□□□□□ -0.15
RAB40B-202ENST00000538809 TNFSF10P50591 281 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 RAB10P61026 200 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 ATP6V0D1P61421 351 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 HYAL2Q12891 473 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 DLG1Q12959 904 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 SLMAPQ14BN4 828 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 OR4D1Q15615 310 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 SFT2D3Q587I9 215 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 CDKL4Q5MAI5 379 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 ABHD17BQ5VST6 288 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 PAPD4Q6PIY7 484 aaKnown RBP14.09□□□□□ -0.15
RAB40B-202ENST00000538809 FAM180AQ6UWF9 173 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 ABHD13Q7L211 337 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 RELL1Q8IUW5 271 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 OR1F2PQ96R84 312 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 SLC6A16Q9GZN6 736 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 AICDAQ9GZX7 198 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.09□□□□□ -0.157e-9■■■■□ 20
RAB40B-202ENST00000538809 WWOXQ9NZC7 414 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-202ENST00000538809 MYO7BQ6PIF6 2116 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 NBPF19A0A087WUL8 3843 aa14.09□□□□□ -0.15
RAB40B-202ENST00000538809 A0A0G2JN53 185 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 HMX2A2RU54 273 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 A8MUI8 341 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 PRAMEF4O60810 478 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 B4GALT2O60909 372 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 TUBB4AP04350 444 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 ICAM2P13598 275 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms