RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 C8BP07358 591 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 F7P08709 466 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 CSF2RAP15509 400 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 EMX2Q04743 252 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 SPIN3Q5JUX0 258 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 PACRGLQ8N7B6 248 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF565Q8N9K5 539 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 TMBIM1Q969X1 311 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 TSSK6Q9BXA6 273 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 IL21RQ9HBE5 538 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZDHHC18Q9NUE0 388 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ASB6Q9NWX5 421 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 NLGN3Q9NZ94 848 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 DNAJB4Q9UDY4 337 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 PCDHB14Q9Y5E9 798 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 H7BY64 318 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 J3QLW9 94 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 HSPA12AO43301 675 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 GSRP00390 522 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF19P17023 458 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 GKP32189 559 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ID2Q02363 134 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF782Q6ZMW2 699 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF384Q8TF68 577 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 CANT1Q8WVQ1 401 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 SH3YL1Q96HL8 342 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 PTCHD1Q96NR3 888 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 PRAP1Q96NZ9 151 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 MND1Q9BWT6 205 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 RETREG1Q9H6L5 497 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 POPDC3Q9HBV1 291 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 A0A1W2PP55 124 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 CLPXO76031 633 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 KDM4BO94953 1096 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 CH25HO95992 272 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 IFI30P13284 250 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 MAD2L1BPQ15013 274 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 UPP1Q16831 310 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 C1orf94Q6P1W5 598 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF598Q86UK7 904 aaKnown RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 AQP11Q8NBQ7 271 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 SMURF1Q9HCE7 757 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ETAA1Q9NY74 926 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 GPR34Q9UPC5 381 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 WASF2Q9Y6W5 498 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 GSK3BP49841 420 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 CDH11P55287 796 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 RING1Q06587 406 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ASTE1Q2TB18 679 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ZNF550Q7Z398 422 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 EZH1Q92800 747 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-205ENST00000538291 PYURFQ96I23 114 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 ALPK1Q96QP1 1244 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 DEFB126Q9BYW3 111 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 IL23AQ9NPF7 189 aa16.26■□□□□ 0.19
SCARB1-205ENST00000538291 A6NCN8 305 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 DUX1O43812 170 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 ITIH1P19827 911 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 FPR1P21462 350 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 WDR4P57081 412 aaKnown RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 TRAM1L1Q8N609 369 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 HSH2DQ96JZ2 352 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MAGEE1Q9HCI5 957 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 RNF186Q9NXI6 227 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 SIX4Q9UIU6 781 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 OAZ3Q9UMX2 235 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 OR7A10O76100 309 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 INMTO95050 263 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 GGT5P36269 586 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MECP2P51608 486 aaKnown RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 ARPC4P59998 168 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 OGDHQ02218 1023 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MRPL49Q13405 166 aaKnown RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 CARTPTQ16568 116 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 FAM43BQ6ZT52 329 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 PIGWQ7Z7B1 504 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 C7orf57Q8NEG2 295 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 GLYATL1Q969I3 302 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 ERMAPQ96PL5 475 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 CHIAQ9BZP6 476 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 A0A1W2PP18 115 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 RNF13O43567 381 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 RNGTTO60942 597 aaKnown RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 HTR1AP08908 422 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 GRIA2P42262 883 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 GLP1RP43220 463 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 SLC3A1Q07837 685 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 LMAN2Q12907 356 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 SPANXN4Q5MJ08 99 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 ASPGQ86U10 573 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 METTL27Q8N6F8 245 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-205ENST00000538291 THRSPQ92748 146 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 GPR174Q9BXC1 333 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 MED11Q9P086 117 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 B4GALT7Q9UBV7 327 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 PLCL2Q9UPR0 1127 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 ETV3P41162 512 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
SCARB1-205ENST00000538291 TMPRSS9Q7Z410 1059 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms