RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CCDC25Q86WR0 208 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 BCORP1Q8N888 145 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 UTP15Q8TED0 518 aaKnown RBP13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 ANKRD7Q92527 254 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 TBC1D20Q96BZ9 403 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 C5orf34Q96MH7 638 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 OR1F2PQ96R84 312 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 MCMBPQ9BTE3 642 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 RHBGQ9H310 441 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 POPDC3Q9HBV1 291 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 LANCL2Q9NS86 450 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 OLAHQ9NV23 265 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 TEKT2Q9UIF3 430 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 OSGIN2Q9Y236 505 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 SLC5A6Q9Y289 635 aa13.46□□□□□ -0.25
RTN3P1-201ENST00000536295 UTP20O75691 2785 aaKnown RBP13.46□□□□□ -0.26
RTN3P1-201ENST00000536295 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 OR5H15A6NDH6 313 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 EIF3HO15372 352 aaKnown RBP eCLIP13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 B4GALT2O60909 372 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 LDLRP01130 860 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 FHP07954 510 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 CCDC166P0CW27 439 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 EDN3P14138 238 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 IL10P22301 178 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 HNMTP50135 292 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 PLTPP55058 493 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 OR4D2P58180 307 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 FBXO48Q5FWF7 155 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 TOR1AIP1Q5JTV8 583 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 PAPD4Q6PIY7 484 aaKnown RBP13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 C3orf62Q6ZUJ4 267 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 CTAGE3PQ8IX95 158 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 TRPV3Q8NET8 790 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 SUN3Q8TAQ9 357 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 TAAR6Q96RI8 345 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 DERL2Q9GZP9 239 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 KLHL31Q9H511 634 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 CNTRLQ7Z7A1 2325 aa13.45□□□□□ -0.26
RTN3P1-201ENST00000536295 URADA6NGE7 173 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 H2AFYO75367 372 aaKnown RBP13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 C1GALT1C1LP0DN25 315 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 STMN1P16949 149 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 GNAZP19086 355 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 JAK1P23458 1154 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 SLC6A12P48065 614 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 GPX6P59796 221 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 HYAL2Q12891 473 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 CBLBQ13191 982 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 SLBPQ14493 270 aaKnown RBP eCLIP13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 TGFBIQ15582 683 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 EXT1Q16394 746 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 NIPAL1Q6NVV3 410 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 GPSM1Q86YR5 675 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 BEST3Q8N1M1 668 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 PLPP5Q8NEB5 264 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 M1APQ8TC57 530 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 CCT6BQ92526 530 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 EXT2Q93063 718 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 LPAR4Q99677 370 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 RBBP8Q99708 897 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 CPNE1Q99829 537 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 SLX1AQ9BQ83 275 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 SLC6A16Q9GZN6 736 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 RNF32Q9H0A6 362 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 ANKRD10Q9NXR5 420 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 WWOXQ9NZC7 414 aa13.44□□□□□ -0.26
RTN3P1-201ENST00000536295 ICE1Q9Y2F5 2266 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 A0A0G2JN53 185 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 FAM159BA6NKW6 160 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 C4orf51C9J302 202 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 FAM227AF5H4B4 570 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 PSMD12O00232 456 aaPredicted RBP13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 MAST4O15021 2626 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 LRRTM2O43300 516 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 PRAMEF2O60811 474 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 FAM155BO75949 473 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 RASAL1O95294 804 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 WISP3O95389 354 aaPredicted RBP13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 CD1DP15813 335 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 MAOAP21397 527 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 GMPRP36959 345 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 GP5P40197 560 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 ETF1P62495 437 aaKnown RBP13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 BTG2P78543 158 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 ILF2Q12905 390 aaKnown RBP13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 OR4D1Q15615 310 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 TRADDQ15628 312 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 SLCO4C1Q6ZQN7 724 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 CRLF3Q8IUI8 442 aa13.43□□□□□ -0.26
RTN3P1-201ENST00000536295 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms