RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 LMAN2Q12907 356 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 IL18R1Q13478 541 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 ATP6AP1LQ52LC2 224 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 LRRC73Q5JTD7 316 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 RETSATQ6NUM9 610 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
LIG1-203ENST00000536218 CFAP77Q6ZQR2 320 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 CLDN19Q8N6F1 224 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 CDYL2Q8N8U2 506 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
LIG1-203ENST00000536218 OR10Z1Q8NGY1 313 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 VANGL1Q8TAA9 524 aaPredicted RBP13.48□□□□□ -0.25
LIG1-203ENST00000536218 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 STAG3L4Q8TBR4 150 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 ATOH8Q96SQ7 321 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 SLC35C2Q9NQQ7 365 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 SCML1Q9UN30 329 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 A3GALT2U3KPV4 340 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 MYOFQ9NZM1 2061 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 B4DXG7 233 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 SLC22A5O76082 557 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 MATN4O95460 622 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 CLDN7O95471 211 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 IFNA16P05015 189 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 BCL2L1Q07817 233 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 MRPL28Q13084 256 aaKnown RBP13.48□□□□□ -0.25
LIG1-203ENST00000536218 FLYWCH1Q4VC44 716 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 ASB15Q8WXK1 588 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 ALG14Q96F25 216 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 LINGO1Q96FE5 620 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 MYO19Q96H55 970 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 RNF121Q9H920 327 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 RC3H2Q9HBD1 1191 aaKnown RBP13.48□□□□□ -0.25
LIG1-203ENST00000536218 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
LIG1-203ENST00000536218 TIMP1P01033 207 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 EVI2BP34910 448 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 TTPAP49638 278 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 SCN1BQ07699 218 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 SPATS1Q496A3 300 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 CTSL3PQ5NE16 218 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 BRAT1Q6PJG6 821 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 TMPRSS11AQ6ZMR5 421 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 GLCCI1Q86VQ1 547 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 HIPK1Q86Z02 1210 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 OR2T12Q8NG77 320 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 OR10A6Q8NH74 314 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 SLC46A2Q9BY10 475 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 NXF2Q9GZY0 626 aaKnown RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 C11orf54Q9H0W9 315 aaPredicted RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 ING3Q9NXR8 418 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 TRAV19A0A0A6YYK7 116 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 A0A1W2PRG6 482 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 PRDX3P30048 256 aaKnown RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 RCAN2Q14206 197 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 VWA5B2Q8N398 1253 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 TTC29Q8NA56 475 aaPredicted RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 BOCQ9BWV1 1114 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 ELOVL6Q9H5J4 265 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 SLC52A3Q9NQ40 469 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 MRPL39Q9NYK5 338 aaKnown RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 CD274Q9NZQ7 290 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 IL17CQ9P0M4 197 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 STOML2Q9UJZ1 356 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
LIG1-203ENST00000536218 GPR45Q9Y5Y3 372 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 CHD5Q8TDI0 1954 aa13.47□□□□□ -0.25
LIG1-203ENST00000536218 EEDO75530 441 aaKnown RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 NUDT6P53370 316 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 CRISP3P54108 245 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 TATDN3Q17R31 274 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 RFX4Q33E94 735 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 KLHL17Q6TDP4 642 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 Q6ZNB5 142 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 DCAF4L2Q8NA75 395 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 CLHC1Q8NHS4 586 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 KIAA1191Q96A73 305 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 TCEAL4Q96EI5 215 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 MAGEB10Q96LZ2 347 aaPredicted RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 CRISPLD2Q9H0B8 497 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 TFB2MQ9H5Q4 396 aaKnown RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 ASB8Q9H765 288 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 TRIM45Q9H8W5 580 aaPredicted RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 RIMKLBQ9ULI2 386 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 ANKRD36A6QL64 1941 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 ANAPC1Q9H1A4 1944 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 HIDE1A8MVS5 230 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 LEFTY2O00292 366 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 GGT1P19440 569 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms