RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 WDPCPO95876 746 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ANXA5P08758 320 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 HIST1H2AGP0C0S8 130 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 HIST1H2ADP20671 130 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 MST1P26927 711 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 SLBPQ14493 270 aaKnown RBP eCLIP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 TOR1AIP1Q5JTV8 583 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 AGAP7PQ5VUJ5 663 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 GARNL3Q5VVW2 1013 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 RPS27LQ71UM5 84 aaKnown RBP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 UBE3DQ7Z6J8 389 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ISCA2Q86U28 154 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 CENPLQ8N0S6 344 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 GRHL3Q8TE85 626 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 KCTD4Q8WVF5 259 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 UCN3Q969E3 161 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 HIST1H2AHQ96KK5 128 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 UBXN10Q96LJ8 280 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 RUNDC3BQ96NL0 473 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 AGAP4Q96P64 663 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 IP6K3Q96PC2 410 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 HIST1H2AJQ99878 128 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 EGFL8Q99944 293 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 H2AFJQ9BTM1 129 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 SARGQ9BW04 601 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 DERL2Q9GZP9 239 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ILKAPQ9H0C8 392 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 ALG9Q9H6U8 611 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 C5AR2Q9P296 337 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
SSBP3-215ENST00000533946 NXT1Q9UKK6 140 aaKnown RBP9.07□□□□□ -0.96
SSBP3-215ENST00000533946 TACC2O95359 2948 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 RTCAO00442 366 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 PRKNO60260 465 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 SERPINA7P05543 415 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MTHFD2P13995 350 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ALOX12P18054 663 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 GP5P40197 560 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 AVPR1BP47901 424 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 AP1S2P56377 157 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MFAP5Q13361 173 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 DOC2AQ14183 400 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 SFT2D3Q587I9 215 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MROH9Q5TGP6 573 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ISLR2Q6UXK2 745 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MAATS1Q7Z4T9 603 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CPEB2Q7Z5Q1 589 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF227Q86WZ6 799 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 GPSM1Q86YR5 675 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 KBTBD2Q8IY47 623 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 KLHDC8AQ8IYD2 350 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ZADH2Q8N4Q0 377 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CAMKVQ8NCB2 501 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 OR1N1Q8NGS0 311 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 NT5CQ8TCD5 201 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MVB12AQ96EY5 273 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 QRFPRQ96P65 431 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 GPR78Q96P69 363 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 F2RL3Q96RI0 385 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ATOH8Q96SQ7 321 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CSF3RQ99062 836 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CPNE1Q99829 537 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 HAUS8Q9BT25 410 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 PCBD2Q9H0N5 130 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 LIN28AQ9H9Z2 209 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ANKHQ9HCJ1 492 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ZFP69BQ9UJL9 534 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF223Q9UK11 482 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 PTBP2Q9UKA9 531 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 CDC14AQ9UNH5 594 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 PCDHGB7Q9Y5F8 929 aa9.06□□□□□ -0.96
SSBP3-215ENST00000533946 COPG1Q9Y678 874 aaKnown RBP9.06□□□□□ -0.96
SSBP3-215ENST00000533946 MYO7BQ6PIF6 2116 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 A0A1B0GTL3 188 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ARHGAP10A1A4S6 786 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 H0YIG0 161 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 SAP18O00422 153 aaKnown RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 VPS4BO75351 444 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 PRKRAO75569 313 aaKnown RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CLDN1O95832 211 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 IGHEP01854 428 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ALDOAP04075 364 aaKnown RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 FHP07954 510 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CD63P08962 238 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ENO2P09104 434 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 TFEBP19484 476 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 TNFSF10P50591 281 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 KCNK10P57789 538 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 RAB10P61026 200 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 BTN3A2P78410 334 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms