RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ANKRD37Q7Z713 158 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CTAGE6Q86UF2 777 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GPSM1Q86YR5 675 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CYP4X1Q8N118 509 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 SNX31Q8N9S9 440 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 NT5CQ8TCD5 201 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 FBXO25Q8TCJ0 367 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GRHL3Q8TE85 626 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ANKRD7Q92527 254 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 TSLPQ969D9 159 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 MRRFQ96E11 262 aaKnown RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 C16orf45Q96MC5 204 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 RBBP8Q99708 897 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 DERL2Q9GZP9 239 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 KCNK13Q9HB14 408 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 POPDC3Q9HBV1 291 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CD274Q9NZQ7 290 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ZFP69BQ9UJL9 534 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 COL12A1Q99715 3063 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 POLEQ07864 2286 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 MYO7BQ6PIF6 2116 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 A0A0G2JN53 185 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 A0A1W2PQ72 361 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ESYT3A0FGR9 886 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 FAM159BA6NKW6 160 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 CLGNO14967 610 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 DNAJB6O75190 326 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 URI1O94763 535 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 CBX6O95503 412 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 S100BP04271 92 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 FHP07954 510 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ICAM2P13598 275 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 GNAZP19086 355 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SPRP35270 261 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SOX11P35716 441 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 AHRP35869 848 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 HSPA7P48741 367 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 AGTR2P50052 363 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ST13P50502 369 aaKnown RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 RAB10P61026 200 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 AP2B1P63010 937 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 CDKL1Q00532 357 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 CAV1Q03135 178 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ILF2Q12905 390 aaKnown RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SLBPQ14493 270 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 TGFBIQ15582 683 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 OR4D1Q15615 310 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 NSDHLQ15738 373 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 KBTBD12Q3ZCT8 623 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SFT2D3Q587I9 215 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 C8orf74Q6P047 294 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 PAPD4Q6PIY7 484 aaKnown RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 FAM180AQ6UWF9 173 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ZDHHC24Q6UX98 284 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 RIPOR1Q6ZS17 1223 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 AFAP1L2Q8N4X5 818 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ANKRD53Q8N9V6 530 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 UTP15Q8TED0 518 aaKnown RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 FBF1Q8TES7 1133 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SSC4DQ8WTU2 575 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 ESAMQ96AP7 390 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 TBC1D20Q96BZ9 403 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 RHBDF1Q96CC6 855 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 IMMP1LQ96LU5 166 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 GPR22Q99680 433 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 MCMBPQ9BTE3 642 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 KLHL31Q9H511 634 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
CAPN1-225ENST00000533704 SPENQ96T58 3664 aaKnown RBP9.84□□□□□ -0.83
CAPN1-225ENST00000533704 TRAV17A0A0B4J275 112 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 A1L4Q6 167 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 URADA6NGE7 173 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 PSMD12O00232 456 aaPredicted RBP9.83□□□□□ -0.84
CAPN1-225ENST00000533704 WDPCPO95876 746 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 CYC1P08574 325 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 GSTA2P09210 222 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 GP1BBP13224 206 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 CD1DP15813 335 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 JAK1P23458 1154 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 STX2P32856 288 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SLC6A12P48065 614 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 TNFSF10P50591 281 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 OR4D2P58180 307 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 ATP6V0D1P61421 351 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 RHAGQ02094 409 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
CAPN1-225ENST00000533704 CBLBQ13191 982 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 UAP1Q16222 522 aaPredicted RBP9.83□□□□□ -0.84
CAPN1-225ENST00000533704 GRTP1Q5TC63 336 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 HIST2H2BCQ6DN03 193 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SLCO4C1Q6ZQN7 724 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 CMC1Q7Z7K0 106 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN1-225ENST00000533704 TCAIMQ8N3R3 496 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 TRPV3Q8NET8 790 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 SUN3Q8TAQ9 357 aa9.83□□□□□ -0.84
CAPN1-225ENST00000533704 FAR2Q96K12 515 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms