RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FAM153BP0C7A2 387 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 MTHFD2P13995 350 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 CNTFP26441 200 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 MAGEA12P43365 314 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 XCR1P46094 333 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 AGTR2P50052 363 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 EFNA3P52797 238 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 SKP1P63208 163 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 HYAL2Q12891 473 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 FAM153CQ494X1 144 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 DEFB134Q4QY38 66 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 XKR6Q5GH73 641 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 PRAMEF9Q5VWM5 478 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 NIPAL1Q6NVV3 410 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 KLC3Q6P597 504 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 HPS6Q86YV9 775 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 TTLQ8NG68 377 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 UTP15Q8TED0 518 aaKnown RBP14.53□□□□□ -0.08
CPSF1-210ENST00000532935 PTCD3Q96EY7 689 aaKnown RBP14.53□□□□□ -0.08
CPSF1-210ENST00000532935 GPR78Q96P69 363 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 TRIM4Q9C037 500 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 PITHD1Q9GZP4 211 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-210ENST00000532935 VN1R1Q9GZP7 353 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 KLHL31Q9H511 634 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 ZNF552Q9H707 407 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-210ENST00000532935 NT5DC2Q9H857 520 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 C5AR2Q9P296 337 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 COPG2Q9UBF2 871 aa14.53□□□□□ -0.08
CPSF1-210ENST00000532935 UBR5O95071 2799 aaPredicted RBP14.52□□□□□ -0.08
CPSF1-210ENST00000532935 MYO18BQ8IUG5 2567 aa14.52□□□□□ -0.08
CPSF1-210ENST00000532935 CNTRLQ7Z7A1 2325 aa14.52□□□□□ -0.08
CPSF1-210ENST00000532935 EXOC1LA0A1B0GW35 172 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 A0A1W2PQ72 361 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 PYCARD-AS1I3L0S3 204 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 K7EPI3 171 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 RIPK2O43353 540 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 DPM1O60762 260 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 ALPPP05187 535 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 CYC1P08574 325 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 COX6A1P12074 109 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 EPORP19235 508 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 GSTM2P28161 218 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 HNF4AP41235 474 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 RAB8AP61006 207 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 TLE1Q04724 770 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 EEF1A2Q05639 463 aaKnown RBP14.52□□□□□ -0.09
CPSF1-210ENST00000532935 DOC2AQ14183 400 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 MINDY4Q4G0A6 757 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 NADK2Q4G0N4 442 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 TOR1AIP1Q5JTV8 583 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 MFSD4BQ5TF39 518 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 TMEM205Q6UW68 189 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 NDUFAF7Q7L592 441 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 PARP9Q8IXQ6 854 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 PLD6Q8N2A8 252 aaKnown RBP14.52□□□□□ -0.09
CPSF1-210ENST00000532935 OR5T3Q8NGG3 340 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 WDR34Q96EX3 536 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 SEC16BQ96JE7 1060 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 EFCAB11Q9BUY7 163 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 TXLNGYQ9BZA5 131 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 AICDAQ9GZX7 198 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF160Q9HCG1 818 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 OPTCQ9UBM4 332 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 CPAMD8Q8IZJ3 1885 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 NBASA2RRP1 2371 aa14.52□□□□□ -0.09
CPSF1-210ENST00000532935 LOC102723996A0A087X1L8 192 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 IGHV1-45A0A0A0MS14 117 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 NSG1A0A0A6YYJ2 146 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 TRIM49D1C9J1S8 452 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 C8orf89P0DMQ9 161 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 SMIM10L1P0DMW3 83 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 GFAPP14136 432 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 CD22P20273 847 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 IL10P22301 178 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 STXBP1P61764 594 aaKnown RBP14.51□□□□□ -0.09
CPSF1-210ENST00000532935 OLR1P78380 273 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 IRF8Q02556 426 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 Q0VFX4 171 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 CHIT1Q13231 466 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 LAPTM5Q13571 262 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 SETDB1Q15047 1291 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 TBCCQ15814 346 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 TECRLQ5HYJ1 363 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 TEX35Q5T0J7 233 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 IRAK1BP1Q5VVH5 260 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 GSPT2Q8IYD1 628 aaKnown RBP14.51□□□□□ -0.09
CPSF1-210ENST00000532935 RBMXL3Q8N7X1 1067 aaKnown RBP14.51□□□□□ -0.09
CPSF1-210ENST00000532935 METTL21AQ8WXB1 218 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 CCT6BQ92526 530 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 PEX11GQ96HA9 241 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 SMIM10Q96HG1 83 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 THOC3Q96J01 351 aaKnown RBP14.51□□□□□ -0.09
CPSF1-210ENST00000532935 OR1F2PQ96R84 312 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 RBCK1Q9BYM8 510 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 LHPPQ9H008 270 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF358Q9NW07 568 aa14.51□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF490Q9ULM2 529 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-210ENST00000532935 OR2W5A6NFC9 320 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 ANKDD1BA6NHY2 528 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 C4orf51C9J302 202 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms