RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MTFR2Q6P444 385 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NCCRP1Q6ZVX7 275 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC5A8Q8N695 610 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 GRK7Q8WTQ7 553 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NEIL2Q969S2 332 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 TBC1D20Q96BZ9 403 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CERS2Q96G23 380 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 MAGED4Q96JG8 741 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 TSNARE1Q96NA8 513 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 OLFM1Q99784 485 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 SARGQ9BW04 601 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CDCP1Q9H5V8 836 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 NPIPA1Q9UND3 350 aa16.04■□□□□ 0.16
RPUSD4-207ENST00000532800 CACNA1CQ13936 2221 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 NDC80O14777 642 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 B4GALT2O60909 372 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 TTC4O95801 387 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 IL10P22301 178 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 ELAVL4P26378 380 aaKnown RBP16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 CASP6P55212 293 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 AP1S2P56377 157 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 TAS2R50P59544 299 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 IL2P60568 153 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 BTG2P78543 158 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 PWP1Q13610 501 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 HP1BP3Q5SSJ5 553 aaPredicted RBP16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 HECTD2Q5U5R9 776 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 SIAH3Q8IW03 269 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 TMEM178AQ8NBL3 297 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 ACTRT1Q8TDG2 376 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 ELP5Q8TE02 316 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 THAP3Q8WTV1 239 aaPredicted RBP16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 FBXL8Q96CD0 374 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 OSBPL9Q96SU4 736 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 RUBCNLQ9H714 662 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 LRFN1Q9P244 771 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 ASIC3Q9UHC3 531 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 ZNF835Q9Y2P0 537 aa16.03■□□□□ 0.16
RPUSD4-207ENST00000532800 PABPN1LA6NDY0 278 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 SP1P08047 785 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 ESRRAP11474 423 aaPredicted RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 TPP2P29144 1249 aaPredicted RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 HNF4AP41235 474 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 SCTRP47872 440 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 HSF1Q00613 529 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 GTF3C1Q12789 2109 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 TEDDM1Q5T9Z0 273 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 Q6ZPB1 254 aaPredicted RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 KIAA0408Q6ZU52 694 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 GDF7Q7Z4P5 450 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 RPS19BP1Q86WX3 136 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 SPPL2CQ8IUH8 684 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 CYP4X1Q8N118 509 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 LGI4Q8N135 537 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 ANKRD53Q8N9V6 530 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 GABPB2Q8TAK5 448 aaPredicted RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 NT5CQ8TCD5 201 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 UTP15Q8TED0 518 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC5A11Q8WWX8 675 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 PWWP2AQ96N64 755 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 WDR83Q9BRX9 315 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 DDX47Q9H0S4 455 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 CHST11Q9NPF2 352 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 PPANQ9NQ55 473 aaKnown RBP16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 ZFP69BQ9UJL9 534 aa16.02■□□□□ 0.16
RPUSD4-207ENST00000532800 ADGRG4Q8IZF6 3080 aa16.02■□□□□ 0.15
RPUSD4-207ENST00000532800 TACC2O95359 2948 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 C4orf51C9J302 202 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 C19orf84I3L1E1 186 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 COX6B1P14854 86 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 POU3F2P20265 443 aaPredicted RBP16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 MAOAP21397 527 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 JAK1P23458 1154 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 PTGER4P35408 488 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 RAB8AP61006 207 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 REEP5Q00765 189 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 RGS1Q08116 209 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 HYAL2Q12891 473 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 CSHL1Q14406 222 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 MAPKAPK3Q16644 382 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 KRTCAP3Q53RY4 240 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 RNFT1Q5M7Z0 435 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 SLC25A25Q6KCM7 469 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 XKRXQ6PP77 449 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 SBSNQ6UWP8 590 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 STRA8Q7Z7C7 330 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 GALNT7Q86SF2 657 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 TMPRSS11BQ86T26 416 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 ZNF227Q86WZ6 799 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 CFAP36Q96G28 342 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 PTCHD1Q96NR3 888 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 TRIM51Q9BSJ1 452 aa16.01■□□□□ 0.15
RPUSD4-207ENST00000532800 TRIM54Q9BYV2 358 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms