RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 RHBGQ9H310 441 aa11.34□□□□□ -0.59
TRAF3IP2-212ENST00000532708 LOC400499M0QZD8 3231 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MAP1BP46821 2468 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 H0YIV9 168 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FOXS1O43638 330 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MLYCDO95822 493 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TGFB1P01137 390 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SERPINA6P08185 405 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ZNF888P0CJ79 500 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 IL1RNP18510 177 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 AGXTP21549 392 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 F8A1P23610 371 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 HNRNPH1P31943 449 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 STAT5AP42229 794 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 RAB8AP61006 207 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DCDP81605 110 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MAP7Q14244 749 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 NKAIN1Q4KMZ8 207 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SGO1Q5FBB7 561 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TOR1AIP1Q5JTV8 583 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MANEAQ5SRI9 462 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 YOD1Q5VVQ6 348 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 GARNL3Q5VVW2 1013 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MLIPQ5VWP3 458 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TTC19Q6DKK2 380 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SHISA5Q8N114 240 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CDYL2Q8N8U2 506 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 NT5CQ8TCD5 201 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ZNF473Q8WTR7 871 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CT55Q8WUE5 264 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 UBE2E3Q969T4 207 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MMABQ96EY8 250 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ZNF382Q96SR6 550 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SLC6A16Q9GZN6 736 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MID1IP1Q9NPA3 183 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SLC22A11Q9NSA0 550 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FARSBQ9NSD9 589 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CROTQ9UKG9 612 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
TRAF3IP2-212ENST00000532708 A0A0G2JN53 185 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 C4orf51C9J302 202 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CLEC3AO75596 197 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CAPN1P07384 714 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DHRS4L1P0CG22 281 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DLSTP36957 453 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 EMP3P54852 163 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FOXL2P58012 376 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FAM69BQ5VUD6 431 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 PDSS2Q86YH6 399 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SPACA3Q8IXA5 215 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 WDR20Q8TBZ3 569 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 PROKR1Q8TCW9 393 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 COL26A1Q96A83 441 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 F2RL3Q96RI0 385 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 OR51B5Q9H339 312 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TNFRSF12AQ9NP84 129 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 IFT80Q9P2H3 777 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TIMM22Q9Y584 194 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DSPP15924 2871 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ZNF860A6NHJ4 632 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MAGEB17A8MXT2 336 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SGK494L7N484 410 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DNAJB6O75190 326 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CHRNGP07510 517 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 LIFP15018 202 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ITPKBP27987 946 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 PLA2G16P53816 162 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FOXA1P55317 472 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 RPS13P62277 151 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ASPHQ12797 758 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FAM53BQ14153 422 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CHI3L2Q15782 390 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 SYT16Q17RD7 645 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 DEFB134Q4QY38 66 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 HHATQ5VTY9 493 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CES4AQ5XG92 561 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FRG2Q64ET8 278 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 ATG14Q6ZNE5 492 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 TMEM151BQ8IW70 566 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 METTL6Q8TCB7 284 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 UTP15Q8TED0 518 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 MS4A6EQ96DS6 147 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 FRG2BQ96QU4 278 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 HBEGFQ99075 208 aa11.32□□□□□ -0.6
TRAF3IP2-212ENST00000532708 YIPF2Q9BWQ6 316 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms