RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 DEFB133Q30KQ1 61 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 INAVAQ3KP66 663 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 ADPRMQ3LIE5 342 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 MMEL1Q495T6 779 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 ZC3H12BQ5HYM0 836 aaKnown RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 KIAA1614Q5VZ46 1190 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 PAOXQ6QHF9 649 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 KANSL1Q7Z3B3 1105 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 R3HCC1LQ7Z5L2 792 aaKnown RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SNX32Q86XE0 403 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SLC25A45Q8N413 288 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 CAMKVQ8NCB2 501 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 OR4C6Q8NH72 309 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 OR10G6Q8NH81 332 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 FLVCR1-AS1Q8TAF5 88 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 BAHD1Q8TBE0 780 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 NT5CQ8TCD5 201 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 PROKR1Q8TCW9 393 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SAP25Q8TEE9 199 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 RGMAQ96B86 450 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 MTERF3Q96E29 417 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 PRR11Q96HE9 360 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 APOLD1Q96LR9 279 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 HBEGFQ99075 208 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 HOPXQ9BPY8 73 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 C1orf50Q9BV19 199 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 NLNQ9BYT8 704 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 CLMPQ9H6B4 373 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SLC6A20Q9NP91 592 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 TIMMDC1Q9NPL8 285 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 TAS2R1Q9NYW7 299 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 LEF1Q9UJU2 399 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 PRPF19Q9UMS4 504 aaKnown RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 G3BP2Q9UN86 482 aaKnown RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SH2B3Q9UQQ2 575 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 POLR3HQ9Y535 204 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-228ENST00000531007 PCDHGB2Q9Y5G2 931 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 SPAG17Q6Q759 2223 aa9.43□□□□□ -0.9
CTNND1-228ENST00000531007 C15orf38-AP3S2A0A0A6YYH1 394 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 PRAMEF33A0A0G2JMD5 474 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 LOC100653049A0A140TA62 436 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ARHGAP10A1A4S6 786 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ANKRD28O15084 1053 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 PPM1DO15297 605 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 TOX3O15405 576 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SRPX2O60687 465 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 EEDO75530 441 aaKnown RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 KRT34O76011 436 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 CFIP05156 583 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SLC35G6P0C7Q6 338 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 HPCAL1P37235 193 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 DUSP3P51452 185 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 CORO7P57737 925 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SKP1P63208 163 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ZNF763Q0D2J5 394 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SHBQ15464 509 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 TCEA2Q15560 299 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 HLA-BQ31612 363 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 FIGLAQ6QHK4 219 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RIPOR1Q6ZS17 1223 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RNF44Q7L0R7 432 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 COMMD6Q7Z4G1 85 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 CAMKMTQ7Z624 323 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ARPINQ7Z6K5 226 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 NUDT13Q86X67 352 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 KMT5CQ86Y97 462 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 PLXDC1Q8IUK5 500 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 FUNDC1Q8IVP5 155 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 PGAM4Q8N0Y7 254 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 LIX1Q8N485 282 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ANKRD53Q8N9V6 530 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 VPS37AQ8NEZ2 397 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 CREB3L4Q8TEY5 395 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 PATE1Q8WXA2 126 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 NAT6Q93015 286 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RERGQ96A58 199 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 MCUR1Q96AQ8 359 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SPDL1Q96EA4 605 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 TCTN2Q96GX1 697 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 APIPQ96GX9 242 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ZNF764Q96H86 408 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 AHCYL2Q96HN2 611 aaKnown RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 MARK4Q96L34 752 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 KCNC2Q96PR1 638 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 TBCDQ9BTW9 1192 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 REXO4Q9GZR2 422 aaKnown RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 IRF2BPLQ9H1B7 796 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 KCNH6Q9H252 994 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 SPNS1Q9H2V7 528 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RMND5AQ9H871 391 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ATAD3AQ9NVI7 634 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 LRIT1Q9P2V4 623 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RAPGEFL1Q9UHV5 662 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
CTNND1-228ENST00000531007 CACNA1HO95180 2353 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
CTNND1-228ENST00000531007 ARHGEF17Q96PE2 2063 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms